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13_1_20cm_4_scaffold_87

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Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_87_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

1..444
DNA (444bp) protein (148aa)
short-chain dehydrogenase/reductase SDR Tax=GWC2_Rokubacteria_70_16_curated
Uncharacterized protein id=3068161 bin=GWC2_Methylomirabilis_70_16 species=Pseudomonas sp. GM50 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
fabG; 3-oxoacyl-ACP reductase
13_1_20cm_4_scaffold_87_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

520..1698
DNA (1179bp) protein (393aa)
acyl-CoA dehydrogenase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Acyl-CoA dehydrogenase domain protein id=4485927 bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
acyl-CoA dehydrogenase domain-containing protein
13_1_20cm_4_scaffold_87_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1701..2483
DNA (783bp) protein (261aa)
enoyl-CoA hydratase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Enoyl-CoA hydratase/isomerase family protein id=3068152 bin=GWC2_Methylomirabilis_70_16 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
enoyl-CoA hydratase
13_1_20cm_4_scaffold_87_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2542..3138
DNA (597bp) protein (199aa)
id=4885132 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=14625322 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_20cm_4_scaffold_87_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3139..3717)
DNA (579bp) protein (193aa)
ThiJ/PfpI domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ThiJ/PfpI domain-containing protein id=14625351 bin=bin7_NC10_sister species=Bacillus methanolicus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
ThiJ/PfpI domain-containing protein
13_1_20cm_4_scaffold_87_6
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(3714..4409)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TCE3_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH89960.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
hypothetical protein
13_1_20cm_4_scaffold_87_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4411..4935)
DNA (525bp) protein (175aa)
carbonic anhydrase Tax=GWA2_Rokubacteria_70_23_curated
siderophore-binding protein id=4485938 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
carbonic anhydrase
13_1_20cm_4_scaffold_87_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5006..6031
DNA (1026bp) protein (342aa)
Chalcone and stilbene synthase domain protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Chalcone and stilbene synthase domain protein id=14627397 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Chalcone and stilbene synthase domain protein
13_1_20cm_4_scaffold_87_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6041..6709
DNA (669bp) protein (223aa)
SAM-dependent methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
type 11 methyltransferase id=14627396 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
methyltransferase type 11
13_1_20cm_4_scaffold_87_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6706..7902
DNA (1197bp) protein (399aa)
Electron transfer oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative Electron transfer oxidoreductase id=4485942 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
Electron transfer oxidoreductase
13_1_20cm_4_scaffold_87_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7942..8607
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EA8FE3
dimethylmenaquinone methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dimethylmenaquinone methyltransferase
13_1_20cm_4_scaffold_87_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(8693..9274)
DNA (582bp) protein (194aa)
peptidase M23 Tax=GWC2_Rokubacteria_70_16_curated
Peptidase M23 id=4485944 bin=GWC2_Methylomirabilis_70_24 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
peptidase M23
13_1_20cm_4_scaffold_87_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9271..9966)
DNA (696bp) protein (232aa)
peptidase M23 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Peptidase M23 id=4485944 bin=GWC2_Methylomirabilis_70_24 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Peptidase M23
13_1_20cm_4_scaffold_87_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

10042..12525
DNA (2484bp) protein (828aa)
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
Putative uncharacterized protein id=2961852 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Accumulibacter phosphatis genus=Candidatus Accumulibacter taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
tetratricopeptide repeat domain protein
13_1_20cm_4_scaffold_87_15
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

12519..14399
DNA (1881bp) protein (627aa)
guanylate cyclase Tax=CSP1_6_Rokubacteria
guanylate cyclase id=14627487 bin=bin7_NC10_sister species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10 rbh
guanylate cyclase
13_1_20cm_4_scaffold_87_16
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

14399..15337
DNA (939bp) protein (313aa)
id=14627488 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10 rbh
Tax=CSP1_6_Rokubacteria
13_1_20cm_4_scaffold_87_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15396..17270
DNA (1875bp) protein (625aa)
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] id=14625912 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5)
13_1_20cm_4_scaffold_87_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17287..18780
DNA (1494bp) protein (498aa)
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5)
Proton-translocating NADH-quinone oxidoreductase, chain M id=3704552 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_87_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18777..20225
DNA (1449bp) protein (483aa)
nuoN-1; NADH dehydrogenase I subunit N; K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NADH-quinone oxidoreductase subunit N id=3704556 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
nuoN-1; NADH dehydrogenase I subunit N
13_1_20cm_4_scaffold_87_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

20309..21022
DNA (714bp) protein (238aa)
had-superfamily hydrolase, subfamily iia; K02566 NagD protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
HAD-superfamily hydrolase, subfamily IIA id=4644046 bin=GWF2_Methylomirabilis_70_14 species=Oceanithermus profundus genus=Oceanithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
had-superfamily hydrolase, subfamily iia
13_1_20cm_4_scaffold_87_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

21019..22641
DNA (1623bp) protein (541aa)
FAD dependent oxidoreductase; K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
FAD dependent oxidoreductase id=4903986 bin=GWC2_Methylomirabilis_70_16 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
FAD dependent oxidoreductase
13_1_20cm_4_scaffold_87_22
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22714..24012
DNA (1299bp) protein (433aa)
Extracellular solute-binding protein, family 1 n=1 Tax=alpha proteobacterium BAL199 RepID=A8U109_9PROT rbh
Extracellular solute-binding protein, family 1 {ECO:0000313|EMBL:EDP61946.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
extracellular solute-binding protein
13_1_20cm_4_scaffold_87_23
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24021..24902
DNA (882bp) protein (294aa)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K1Y4_9PROT rbh
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:EKE71510.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillace
ugpA; sn-glycerol-3-phosphate transport system permease protein
13_1_20cm_4_scaffold_87_24
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24902..25750
DNA (849bp) protein (283aa)
twin-arginine translocation pathway signal protein; K05815 sn-glycerol 3-phosphate transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
Twin-arginine translocation pathway signal id=1270318 bin=GWE1_Burkholderiales_65_30 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
twin-arginine translocation pathway signal protein
13_1_20cm_4_scaffold_87_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

25747..26499
DNA (753bp) protein (251aa)
glycerophosphodiester phosphodiesterase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycerophosphodiester phosphodiesterase family protein id=4980422 bin=GWA2_Methylomirabilis_73_35 species=Acetobacteraceae bacterium AT-5844 genus=unknown taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycerophosphodiester phosphodiesterase
13_1_20cm_4_scaffold_87_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

26513..28027
DNA (1515bp) protein (505aa)
glycerol kinase (EC:2.7.1.30); K00864 glycerol kinase [EC:2.7.1.30] Tax=GWA2_Rokubacteria_73_35_curated
glpK; glycerol kinase (EC:2.7.1.30)
Glycerol kinase id=4980423 bin=GWA2_Methylomirabilis_73_35 species=Meiothermus ruber genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_87_27
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

28065..29174
DNA (1110bp) protein (370aa)
extracellular solute-binding protein Tax=GWA2_Rokubacteria_70_23_curated
Extracellular solute-binding protein, family 1 id=4644135 bin=GWF2_Methylomirabilis_70_14 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
extracellular solute-binding protein
13_1_20cm_4_scaffold_87_28
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29461..30126
DNA (666bp) protein (222aa)
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262) Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002F21EB5
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase
13_1_20cm_4_scaffold_87_29
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

30123..31196
DNA (1074bp) protein (358aa)
ABC transporter-like protein; K02052 putative spermidine/putrescine transport system ATP-binding protein Tax=CSP1_6_Rokubacteria
ABC transporter-like protein; K02052 putative spermidine/putrescine transport system ATP-binding protein id=14625920 bin=bin7_NC10_sister species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter-like protein
13_1_20cm_4_scaffold_87_30
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

31177..32883
DNA (1707bp) protein (569aa)
binding-protein-dependent transport system inner membrane protein; K02011 iron(III) transport system permease protein Tax=CSP1_6_Rokubacteria
binding-protein-dependent transport system inner membrane protein; K02011 iron(III) transport system permease protein id=14625921 bin=bin7_NC10_sister species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
binding-protein-dependent transport system inner membrane protein
Displaying items 1-30 of 33 in total

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