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13_1_20cm_4_scaffold_903

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_903_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(344..679)
DNA (336bp) protein (112aa)
Uncharacterized protein n=2 Tax=Pseudogulbenkiania RepID=B9Z4N3_9NEIS
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_4_scaffold_903_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(748..1518)
DNA (771bp) protein (257aa)
phosphotransferase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Probable phosphotransferase id=1884917 bin=GWA2_Methylomirabilis_73_35 species=Paenibacillus sp. oral taxon 786 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
had-superfamily hydrolase, subfamily iia
13_1_20cm_4_scaffold_903_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1476..2579)
DNA (1104bp) protein (368aa)
glycogen synthase Tax=GWA2_Rokubacteria_73_35_curated
Glycogen synthase id=1884913 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RfaG2; glycosyltransferase
13_1_20cm_4_scaffold_903_4
R_NC10_66_22, NC10, Bacteria

Not on your lists

2600..3058
DNA (459bp) protein (153aa)
intradiol ring-cleavage dioxygenase Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
intradiol ring-cleavage dioxygenase id=14625204 bin=bin7_NC10_sister species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
intradiol ring-cleavage dioxygenase
13_1_20cm_4_scaffold_903_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3060..5828)
DNA (2769bp) protein (923aa)
PAS/PAC sensor hybrid histidine kinase Tax=GWC2_Rokubacteria_70_16_curated
PAS/PAC sensor hybrid histidine kinase id=4942499 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
multi-sensor hybrid histidine kinase
13_1_20cm_4_scaffold_903_6
CSP1_5_NC10, NC10, Bacteria

Not on your lists

6282..6494
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D437E
putative outer membrane protein Tax=CSP1_5_NC10
outer membrane protein
13_1_20cm_4_scaffold_903_7
CSP1_5_NC10, NC10, Bacteria

Not on your lists

6504..6806
DNA (303bp) protein (101aa)
hypothetical protein Tax=CSP1_5_NC10
hypothetical protein id=14430015 bin=bin3_NC10 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
13_1_20cm_4_scaffold_903_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6828..7394)
DNA (567bp) protein (189aa)
sigma-54 dependent DNA-binding response regulator; K07713 two-component system, NtrC family, response regulator HydG Tax=GWA2_Rokubacteria_73_35_curated
Two component, sigma54 specific, transcriptional regulator, Fis family id=1884909 bin=GWA2_Methylomirabilis_73_35 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sigma-54 dependent DNA-binding response regulator
13_1_20cm_4_scaffold_903_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8084..9379)
DNA (1296bp) protein (432aa)
integral membrane sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Integral membrane sensor signal transduction histidine kinase id=1884757 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein
13_1_20cm_4_scaffold_903_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9480..10070)
DNA (591bp) protein (197aa)
membrane-associated protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
SNARE associated Golgi protein-like protein id=2913053 bin=GWC2_Methylomirabilis_70_16 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
DedA protein family
13_1_20cm_4_scaffold_903_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10114..11181
DNA (1068bp) protein (356aa)
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase group 1 id=1884755 bin=GWA2_Methylomirabilis_73_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycosyl transferase
13_1_20cm_4_scaffold_903_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11187..11639)
DNA (453bp) protein (151aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
RlpA-like lipoprotein id=2336348 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rare lipoprotein A
13_1_20cm_4_scaffold_903_13
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

11803..13527
DNA (1725bp) protein (575aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ECZ4_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF82556.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
phosphoglycolate phosphatase
13_1_20cm_4_scaffold_903_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13546..14523)
DNA (978bp) protein (326aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=1884751 bin=GWA2_Methylomirabilis_73_35 species=Methanoculleus marisnigri genus=Methanoculleus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_903_15
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(14527..15111)
DNA (585bp) protein (195aa)
type 11 methyltransferase Tax=RBG_16_Acidobacteria_70_10_curated
Methyltransferase type 11 id=1884749 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
type 11 methyltransferase
13_1_20cm_4_scaffold_903_16
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

comp(15120..16283)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B6DABF
hypothetical protein Tax=CG_Arma_02
hypothetical protein
13_1_20cm_4_scaffold_903_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(16280..16444)
DNA (165bp) protein (55aa)
isochorismatase hydrolase; K08281 nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
isochorismatase hydrolase; K08281 nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] id=14627128 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
13_1_20cm_4_scaffold_903_18
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

16815..17921
DNA (1107bp) protein (369aa)
acetamidase/formamidase Tax=CSP1_6_Rokubacteria
acetamidase/formamidase id=14627591 bin=bin7_NC10_sister species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
acetamidase/formamidase
13_1_20cm_4_scaffold_903_19
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

17972..18835
DNA (864bp) protein (288aa)
periplasmic solute binding protein; K09815 zinc transport system substrate-binding protein Tax=CSP1_6_Rokubacteria
periplasmic solute binding protein; K09815 zinc transport system substrate-binding protein id=14627590 bin=bin7_NC10_sister species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
periplasmic solute binding protein
13_1_20cm_4_scaffold_903_20
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

18842..20128
DNA (1287bp) protein (429aa)
ABC-3 protein; K02075 zinc/manganese transport system permease protein Tax=CSP1_6_Rokubacteria
ABC-3 protein; K02075 zinc/manganese transport system permease protein id=14627589 bin=bin7_NC10_sister species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin7_NC10_sister organism_group=NC10
ABC-3 protein
13_1_20cm_4_scaffold_903_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(20167..20958)
DNA (792bp) protein (264aa)
id=4827479 Tax=GWA2_Rokubacteria_70_23_curated
id=4827479 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_20cm_4_scaffold_903_22
unknown

Not on your lists

21145..21432
DNA (288bp) protein (96aa)

This feature has no annotations

13_1_20cm_4_scaffold_903_23
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21581..22258
DNA (678bp) protein (226aa)
asparagine synthase n=1 Tax=Thioalkalivibrio sp. ALMg11 RepID=UPI00036F1313
asparagine synthase Tax=RBG_16_Desulfobacca_60_12_curated
asparagine synthase
13_1_20cm_4_scaffold_903_24
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22408..23025)
DNA (618bp) protein (206aa)
Cytochrome c biogenesis protein {ECO:0000313|EMBL:EYF05663.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="
13_1_20cm_4_scaffold_903_25
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(23025..24740)
DNA (1716bp) protein (572aa)
Multicopper oxidase type 3 n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SYE9_META2
Multicopper oxidase type 3 (fragment) Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Multicopper oxidase type 3 (fragment)
13_1_20cm_4_scaffold_903_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

25009..25764
DNA (756bp) protein (252aa)
uncharacterized LOC100208015 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4806968 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_903_27
unknown

Not on your lists

26014..26556
DNA (543bp) protein (181aa)

This feature has no annotations

Displaying 27 items

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