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SCN18_10_11_15_R1_B_scaffold_3054

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R1_B_scaffold_3054_1
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..246)
DNA (246bp) protein (82aa)
UPI0003CEE9F8 related cluster n=1 Tax=unknown RepID=UPI0003CEE9F8
Uncharacterized protein {ECO:0000313|EMBL:CDX42452.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_3054_2
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(243..785)
DNA (543bp) protein (181aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KI74_MESAW
Putative SigD protein {ECO:0000313|EMBL:CDX23085.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
RNA polymerase sigma factor, sigma-70 family
SCN18_10_11_15_R1_B_scaffold_3054_3
unknown

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comp(907..1083)
DNA (177bp) protein (59aa)

This feature has no annotations

SCN18_10_11_15_R1_B_scaffold_3054_4
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1179..2216)
DNA (1038bp) protein (346aa)
HWE histidine kinase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YDY2_9RHIZ
HWE histidine kinase {ECO:0000313|EMBL:EHH10055.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
HWE histidine kinase
SCN18_10_11_15_R1_B_scaffold_3054_5
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2395..2559)
DNA (165bp) protein (55aa)
UPF0391 membrane protein msr3702 n=7 Tax=Mesorhizobium RepID=Y3702_RHILO
UPF0391 membrane protein CF98_19750 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
Protein of unknown function (DUF1328)
SCN18_10_11_15_R1_B_scaffold_3054_6
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2641..3435)
DNA (795bp) protein (265aa)
Response regulator receiver protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y0L6_MESOW
response regulator receiver protein
Regulatory protein PhyR {ECO:0000313|EMBL:CDX34649.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
SCN18_10_11_15_R1_B_scaffold_3054_7
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3650..3850
DNA (201bp) protein (67aa)
Msl3698 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98FM9_RHILO
hypothetical protein
Msl3698 protein {ECO:0000313|EMBL:BAB50538.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCN18_10_11_15_R1_B_scaffold_3054_8
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3854..4402
DNA (549bp) protein (183aa)
RNA polymerase sigma factor n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F197_9RHIZ
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;"
ECF subfamily RNA polymerase sigma-24 subunit
SCN18_10_11_15_R1_B_scaffold_3054_9
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4453..4857)
DNA (405bp) protein (135aa)
UPI0003CFFA95 related cluster n=1 Tax=unknown RepID=UPI0003CFFA95
Histidine kinase {ECO:0000313|EMBL:ESZ21924.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
response regulator receiver protein
SCN18_10_11_15_R1_B_scaffold_3054_10
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5010..5771
DNA (762bp) protein (254aa)
Transcriptional regulator n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YDX6_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EHH10049.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
transcriptional regulator
SCN18_10_11_15_R1_B_scaffold_3054_11
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5888..6220
DNA (333bp) protein (111aa)
UPI0003CED0F6 related cluster n=1 Tax=unknown RepID=UPI0003CED0F6
Uncharacterized protein {ECO:0000313|EMBL:ESY75356.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_3054_12
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6232..6696
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI0003768398
Uncharacterized protein {ECO:0000313|EMBL:AID32857.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
Displaying 12 items

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