ggKbase home page

SCN18_10_11_15_R1_B_scaffold_247

Search features with annotation key words

Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R1_B_scaffold_247_1
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..87)
DNA (87bp) protein (29aa)
Transposase, orfB n=1 Tax=Nitratireductor indicus C115 RepID=K2N4H5_9RHIZ
Transposase, orfB {ECO:0000313|EMBL:EKF42283.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
ISCc3, transposase
SCN18_10_11_15_R1_B_scaffold_247_2
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84..416)
DNA (333bp) protein (111aa)
Transposase IS3/IS911 family protein n=1 Tax=Nitratireductor indicus C115 RepID=K2PMG9_9RHIZ
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:EKF42282.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
transposase IS3/IS911 family protein
SCN18_10_11_15_R1_B_scaffold_247_3
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(437..1453)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P4I2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF42281.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_247_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1446..2039)
DNA (594bp) protein (198aa)
Uncharacterized protein n=2 Tax=Alphaproteobacteria RepID=C8WDS1_ZYMMN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKF42280.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCN18_10_11_15_R1_B_scaffold_247_5
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2275..3237
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NWS2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF42279.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_247_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3234..3629
DNA (396bp) protein (132aa)
SsDNA-specific exonuclease RecJ n=1 Tax=Nitratireductor indicus C115 RepID=K2N4H0_9RHIZ
SsDNA-specific exonuclease RecJ {ECO:0000313|EMBL:EKF42278.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
ssDNA-specific exonuclease RecJ
SCN18_10_11_15_R1_B_scaffold_247_7
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3754..5892
DNA (2139bp) protein (713aa)
ParB domain-containing protein nuclease n=1 Tax=Nitratireductor indicus C115 RepID=K2PMG3_9RHIZ
ParB domain-containing protein nuclease {ECO:0000313|EMBL:EKF42277.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
ParB domain-containing protein nuclease
SCN18_10_11_15_R1_B_scaffold_247_8
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5990..6295
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P4H7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF42276.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_247_9
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6713..6877
DNA (165bp) protein (55aa)
Uncharacterized protein n=2 Tax=Alphaproteobacteria RepID=T0HMK3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB00550.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_247_10
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7077..7625
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NWR8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF42274.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_247_11
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7691..8107
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2N4G7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF42273.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_247_12
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8100..8744
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2PMG1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF42272.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_247_13
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8902..13224
DNA (4323bp) protein (1441aa)
Methylase/helicase n=1 Tax=Nitratireductor indicus C115 RepID=K2P4H3_9RHIZ
Methylase/helicase {ECO:0000313|EMBL:EKF42271.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
methylase/helicase
SCN18_10_11_15_R1_B_scaffold_247_14
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13224..14261
DNA (1038bp) protein (346aa)
DNA primase (Bacterial type) n=1 Tax=Nitratireductor indicus C115 RepID=K2NSG2_9RHIZ
DNA primase (Bacterial type) {ECO:0000313|EMBL:EKF42270.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
DNA primase (bacterial type)
SCN18_10_11_15_R1_B_scaffold_247_15
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14568..15494
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NWR4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF42269.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_247_16
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15527..16027)
DNA (501bp) protein (167aa)
Uncharacterized protein n=2 Tax=Alphaproteobacteria RepID=K2N4G2_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKF42268.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCN18_10_11_15_R1_B_scaffold_247_17
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16260..16700
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2PMF5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF42267.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_247_18
unknown

Not on your lists

comp(16759..16965)
DNA (207bp) protein (69aa)

This feature has no annotations

SCN18_10_11_15_R1_B_scaffold_247_19
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17267..17593
DNA (327bp) protein (109aa)
Uncharacterized protein n=3 Tax=Alphaproteobacteria RepID=C8WDT8_ZYMMN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKF42266.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCN18_10_11_15_R1_B_scaffold_247_20
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17688..18929)
DNA (1242bp) protein (414aa)
HipA N-terminal domain-containing protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NSF8_9RHIZ
HipA N-terminal domain-containing protein {ECO:0000313|EMBL:EKF42265.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
HipA N-terminal domain-containing protein
SCN18_10_11_15_R1_B_scaffold_247_21
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18907..19227)
DNA (321bp) protein (107aa)
XRE family transcriptional regulator n=1 Tax=Nitratireductor indicus C115 RepID=K2NWR2_9RHIZ
XRE family transcriptional regulator {ECO:0000313|EMBL:KFE34699.1}; TaxID=1317124 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. 13D2W-2.;"
XRE family transcriptional regulator
SCN18_10_11_15_R1_B_scaffold_247_22
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19547..19813
DNA (267bp) protein (89aa)
XRE family transcriptional regulator n=1 Tax=Nitratireductor indicus C115 RepID=K2N4F7_9RHIZ
XRE family transcriptional regulator {ECO:0000313|EMBL:EKF42263.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
XRE family transcriptional regulator
SCN18_10_11_15_R1_B_scaffold_247_23
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19874..20149
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2PME8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF42262.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_247_24
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20278..20610
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4F7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CDX24441.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_247_25
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20591..21028)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Sphingobium chinhatense RepID=UPI00036BB06D
Uncharacterized protein {ECO:0000313|EMBL:EPR17211.1}; TaxID=1346790 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chinhatense IP26.;"
SCN18_10_11_15_R1_B_scaffold_247_26
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21180..21461
DNA (282bp) protein (94aa)
Uncharacterized protein n=2 Tax=Alphaproteobacteria RepID=C8WDU5_ZYMMN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFE34694.1}; TaxID=1317124 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. 13D2W-2.;"
SCN18_10_11_15_R1_B_scaffold_247_27
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21577..22626
DNA (1050bp) protein (350aa)
Replication protein A n=1 Tax=Nitratireductor indicus C115 RepID=K2N4F2_9RHIZ
Replication protein A {ECO:0000313|EMBL:EKF42258.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
replication protein A
SCN18_10_11_15_R1_B_scaffold_247_28
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22623..23276
DNA (654bp) protein (218aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Nitratireductor indicus C115 RepID=K2PME4_9RHIZ
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:EKF42257.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
cobyrinic acid ac-diamide synthase
SCN18_10_11_15_R1_B_scaffold_247_29
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23273..23527
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P4G2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF42256.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_247_30
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23524..24042
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NSE9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF42255.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
Displaying items 1-30 of 89 in total

View Taxonomy