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SCN18_10_11_15_R1_B_scaffold_9

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Displaying items 1-30 of 747 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R1_B_scaffold_9_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..176
DNA (174bp) protein (58aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
eno; phosphopyruvate hydratase (EC:4.2.1.11)
enolase n=1 Tax=Janthinobacterium lividum RepID=UPI000289EF48
SCN18_10_11_15_R1_B_scaffold_9_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(268..1179)
DNA (912bp) protein (304aa)
5-dehydro-4-deoxyglucarate dehydratase (EC:4.2.1.41)
Probable 5-dehydro-4-deoxyglucarate dehydratase {ECO:0000256|HAMAP-Rule:MF_00694}; EC=4.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00694, ECO:0000313|EMBL:CAP63339.1};; 5-keto-4-deoxy-glucarate dehydratase {ECO:0000256|HAMAP-Rule:MF_00694}; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis; (strain LMG 19424)).;"
Probable 5-dehydro-4-deoxyglucarate dehydratase n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QNS7_RALPI
SCN18_10_11_15_R1_B_scaffold_9_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1294..1980)
DNA (687bp) protein (229aa)
GntR family transcriptional regulator n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WYP7_9BURK
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:AJP59969.1}; TaxID=656178 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea vervacti.;"
SCN18_10_11_15_R1_B_scaffold_9_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2112..2609)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000312A95D
Uncharacterized protein {ECO:0000313|EMBL:EHA25614.1}; TaxID=380704 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus.;" source="Aspergillus niger (strain ATCC 1015 / CBS 113.46 / FGSC A1144 / LSHB; Ac4 / NCTC 3858a / NRRL 328 / USDA 3528.7).;"
DinB family protein
SCN18_10_11_15_R1_B_scaffold_9_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2795..4519
DNA (1725bp) protein (575aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000380B451
Diguanylate cyclase {ECO:0000313|EMBL:KDP74197.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
diguanylate cyclase
SCN18_10_11_15_R1_B_scaffold_9_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4556..6190)
DNA (1635bp) protein (545aa)
Putative chelatase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IPU8_BORPD
ATP-dependent protease {ECO:0000313|EMBL:KGY24850.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
chelatase
SCN18_10_11_15_R1_B_scaffold_9_7
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6201..7400)
DNA (1200bp) protein (400aa)
aldehyde dismutase n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI000237687E
alcohol dehydrogenase
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
SCN18_10_11_15_R1_B_scaffold_9_8
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7429..8478)
DNA (1050bp) protein (350aa)
Rieske (2fe-2S) iron-sulfur domain protein {ECO:0000313|EMBL:EIK92693.1}; EC=1.14.13.82 {ECO:0000313|EMBL:EIK92693.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Vanillate O-demethylase oxygenase subunit (EC:1.14.13.82)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00035EB917
SCN18_10_11_15_R1_B_scaffold_9_9
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8489..9562)
DNA (1074bp) protein (358aa)
Vanillate monooxygenase (EC:1.14.13.82)
Vanillate monooxygenase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WPI0_DELAC
Vanillate monooxygenase {ECO:0000313|EMBL:EZP58814.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
SCN18_10_11_15_R1_B_scaffold_9_10
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9764..10576
DNA (813bp) protein (271aa)
aldolase n=1 Tax=Pseudomonas sp. PAMC 26793 RepID=UPI000312C9CB
Ribulose-5-phosphate 4-epimerase-like epimerase or aldolase {ECO:0000313|EMBL:EJN27729.1}; TaxID=1144337 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM78.;"
aldolase II superfamily protein
SCN18_10_11_15_R1_B_scaffold_9_11
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10652..11449
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003620501
2-dehydropantoate 2-reductase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
SCN18_10_11_15_R1_B_scaffold_9_12
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11475..12467
DNA (993bp) protein (331aa)
Uncharacterized protein n=3 Tax=Delftia acidovorans RepID=A9BU50_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD38898.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCN18_10_11_15_R1_B_scaffold_9_13
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12480..13040)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037C5691
MarR family transcription regulator protein
Transcriptional regulator {ECO:0000313|EMBL:EJL81866.1}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
SCN18_10_11_15_R1_B_scaffold_9_14
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13156..14094
DNA (939bp) protein (313aa)
Catechol 1,2-dioxygenase n=2 Tax=Delftia acidovorans RepID=S2WF50_DELAC
Catechol 1,2-dioxygenase {ECO:0000313|EMBL:EPD38383.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
intradiol ring-cleavage dioxygenase
SCN18_10_11_15_R1_B_scaffold_9_15
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14133..14795
DNA (663bp) protein (221aa)
GntR family transcriptional regulator n=2 Tax=Bordetella holmesii RepID=M5NN09_9BORD
Hydrolase {ECO:0000313|EMBL:KDB50395.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
alpha/beta hydrolase family protein
SCN18_10_11_15_R1_B_scaffold_9_16
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14800..15645)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T6P9_CAUSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ69666.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCN18_10_11_15_R1_B_scaffold_9_17
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15655..16398)
DNA (744bp) protein (248aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IEE4_XANP2
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABS66387.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_10_11_15_R1_B_scaffold_9_18
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16458..17435)
DNA (978bp) protein (326aa)
Putative Bug-like extra cytoplasmic solute receptor, TTT family n=1 Tax=Variovorax paradoxus B4 RepID=T1X8X0_VARPD
putative Bug-like extra cytoplasmic solute receptor, TTT family
Putative Bug-like extra cytoplasmic solute receptor, TTT family {ECO:0000313|EMBL:AGU49382.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCN18_10_11_15_R1_B_scaffold_9_19
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17534..18484
DNA (951bp) protein (317aa)
Putative HTH-type transcriptional regulator, LysR family n=1 Tax=Ralstonia solanacearum CMR15 RepID=D8NHZ4_RALSL
putative HTH-type transcriptional regulator, LysR family
Putative HTH-type transcriptional regulator, LysR family {ECO:0000313|EMBL:CBJ40518.1}; TaxID=859655 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum CMR15.;"
SCN18_10_11_15_R1_B_scaffold_9_20
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18481..19419)
DNA (939bp) protein (313aa)
LysR family transcriptional regulator n=1 Tax=Ralstonia sp. PBA RepID=I9BR43_9RALS
LysR family transcriptional regulator {ECO:0000313|EMBL:EIZ02241.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
nahR2; LysR family transcriptional regulator
SCN18_10_11_15_R1_B_scaffold_9_21
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19521..20480
DNA (960bp) protein (320aa)
ABC transporter substrate-binding protein n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2JBW8_9BURK
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESJ24535.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
protein bugT-like protein
SCN18_10_11_15_R1_B_scaffold_9_22
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20494..21552
DNA (1059bp) protein (353aa)
Vanillate monooxygenase n=1 Tax=Burkholderia sp. YI23 RepID=G8MFR3_9BURK
vanillate monooxygenase
Vanillate monooxygenase {ECO:0000313|EMBL:BAO90540.1}; TaxID=758796 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE67.;"
SCN18_10_11_15_R1_B_scaffold_9_23
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21533..22426)
DNA (894bp) protein (298aa)
LysR family transcriptional regulator (EC:4.2.1.1)
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CBV41344.1}; EC=4.2.1.1 {ECO:0000313|EMBL:CBV41344.1};; TaxID=768066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB; 2198 / 1H9).;"
Transcriptional regulator, LysR family n=1 Tax=Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9) RepID=E1V6L5_HALED
SCN18_10_11_15_R1_B_scaffold_9_24
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22538..23428
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9) RepID=E1V6L6_HALED
Epimerase {ECO:0000313|EMBL:KHK53835.1}; TaxID=1217052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. A12.;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_9_25
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23460..23891
DNA (432bp) protein (144aa)
Transcriptional regulator, MarR family n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3Z3L4_DESAF
transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EGJ50386.1}; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus str. Walvis Bay.;"
SCN18_10_11_15_R1_B_scaffold_9_26
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23926..24912)
DNA (987bp) protein (329aa)
Extra-cytoplasmic solute receptor family protein 61 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MH34_9BURK
Extra-cytoplasmic solute receptor family protein 61 {ECO:0000313|EMBL:EIK88524.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_9_27
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24939..26075)
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Wenxinia marina RepID=UPI00037C113F
Luciferase-like, subgroup
Luciferase-like, subgroup {ECO:0000313|EMBL:CDN50871.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
SCN18_10_11_15_R1_B_scaffold_9_28
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26072..26863)
DNA (792bp) protein (264aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Rhizobium sp. CF080 RepID=J2JR38_9RHIZ
2-hydroxymuconic semialdehyde hydrolase
Uncharacterized protein {ECO:0000313|EMBL:EUB98427.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
SCN18_10_11_15_R1_B_scaffold_9_29
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26893..27495)
DNA (603bp) protein (201aa)
NADPH-dependent FMN reductase n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WF64_ACTMD
NADPH-dependent FMN reductase
NADPH-dependent FMN reductase {ECO:0000313|EMBL:ACU34196.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
SCN18_10_11_15_R1_B_scaffold_9_30
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27585..28505)
DNA (921bp) protein (307aa)
Transcriptional regulator LysR family n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GUE6_CUPNN
LysR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Displaying items 1-30 of 747 in total

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