ggKbase home page

SCN18_10_11_15_R1_B_scaffold_1176

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R1_B_scaffold_1176_1
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..833)
DNA (831bp) protein (277aa)
Xaa-Pro aminopeptidase protein (EC:3.4.11.9)
LemA protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IH52_9BRAD
LemA protein {ECO:0000313|EMBL:ERF81844.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
SCN18_10_11_15_R1_B_scaffold_1176_2
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(966..3011)
DNA (2046bp) protein (682aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P541_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36606.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
transcriptional regulator family 1
SCN18_10_11_15_R1_B_scaffold_1176_3
SCN_Rubrivivax_15x, SCN_Rubrivivax_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3143..3988
DNA (846bp) protein (282aa)
methyltransferase (EC:2.1.1.-)
Methyltransferase n=1 Tax=Achromobacter piechaudii HLE RepID=J4QWS4_9BURK
SAM-dependent methlyltransferase {ECO:0000313|EMBL:KGY25869.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
SCN18_10_11_15_R1_B_scaffold_1176_4
SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, Bacteria

Not on your lists

4045..4518
DNA (474bp) protein (158aa)
Cupin region n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12GV5_POLSJ
hypothetical protein
Cupin region {ECO:0000313|EMBL:ABE42237.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
SCN18_10_11_15_R1_B_scaffold_1176_5
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4681..5727
DNA (1047bp) protein (349aa)
cysteine synthase n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000378DE25
Cysteine synthase {ECO:0000313|EMBL:KJC55712.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
cysteine synthase A
SCN18_10_11_15_R1_B_scaffold_1176_6
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5760..6578
DNA (819bp) protein (273aa)
Alpha/beta fold superfamily hydrolase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJG6_9RHIZ
Alpha/beta fold superfamily hydrolase {ECO:0000313|EMBL:EHK59131.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
alpha/beta hydrolase fold protein
SCN18_10_11_15_R1_B_scaffold_1176_7
Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6605..7972)
DNA (1368bp) protein (456aa)
Glycine/D-amino acid oxidase, deaminating n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CX33_9BRAD
Glycine/D-amino acid oxidase, deaminating {ECO:0000313|EMBL:EJN14454.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
putative oxidoreductase protein
SCN18_10_11_15_R1_B_scaffold_1176_8
CN-SCN_Comamonas_56x, CN-SCN_Comamonas_56x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8066..9214
DNA (1149bp) protein (383aa)
luciferase-like monooxygenase n=1 Tax=Bacillus sp. 10403023 RepID=UPI000288D90A
luciferase family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R1_B_scaffold_1176_9
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9268..12414)
DNA (3147bp) protein (1049aa)
acriflavine resistance protein B n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI000377C74B
RND multidrug efflux transporter {ECO:0000313|EMBL:EHH05379.1}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens CCNWGS0286.;"
Putative component of multidrug efflux pump, acrB/acrD/acrF family
SCN18_10_11_15_R1_B_scaffold_1176_10
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12456..13631)
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003136A95
putative efflux transporter, RND family, MFP subunit
Putative efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AHK42984.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
SCN18_10_11_15_R1_B_scaffold_1176_11
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13690..14280)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036F5148
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:EED68244.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
SCN18_10_11_15_R1_B_scaffold_1176_12
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14451..14804)
DNA (354bp) protein (118aa)
Putative HTH-type transcriptional regulator ydfH n=1 Tax=Marinobacter sp. BSs20148 RepID=M1FF47_9ALTE
ydfH; HTH-type transcriptional regulator ydfH
Putative HTH-type transcriptional regulator ydfH {ECO:0000313|EMBL:AFP30719.1}; TaxID=490759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp. BSs20148.;"
Displaying 12 items

View Taxonomy