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SCN18_10_11_15_R1_B_scaffold_1704

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R1_B_scaffold_1704_1
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..369)
DNA (369bp) protein (123aa)
Response regulator receiver protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) PF0_HYPDA">RepID=D8JPF0_HYPDA
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ADJ21841.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCN18_10_11_15_R1_B_scaffold_1704_2
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(464..1867)
DNA (1404bp) protein (468aa)
ATPase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5S911_9RHIZ
ATPase
ATPase {ECO:0000313|EMBL:AHB47251.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCN18_10_11_15_R1_B_scaffold_1704_3
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2064..2666
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000376720F
Marine sediment metagenome DNA, contig: S01H4_S15336 {ECO:0000313|EMBL:GAH17351.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
electron transporter SenC
SCN18_10_11_15_R1_B_scaffold_1704_4
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2691..3842)
DNA (1152bp) protein (384aa)
Putative hydrolase NrgC n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YGW6_9RHIZ
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43415.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_1704_5
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4446..5999
DNA (1554bp) protein (518aa)
Esterase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SB99_9RHIZ
Esterase {ECO:0000313|EMBL:CPR17543.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
esterase
SCN18_10_11_15_R1_B_scaffold_1704_6
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6265..7017
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SGZ5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CPR17541.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_1704_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7133..8323
DNA (1191bp) protein (397aa)
FMN-dependent alpha-hydroxy acid dehydrogenase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UE51_METS4
FMN-dependent alpha-hydroxy acid dehydrogenase
FMN-dependent alpha-hydroxy acid dehydrogenase {ECO:0000313|EMBL:ACA20901.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCN18_10_11_15_R1_B_scaffold_1704_8
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8537..8833)
DNA (297bp) protein (99aa)
30S ribosomal protein S21 n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003740129
30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCN18_10_11_15_R1_B_scaffold_1704_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9251..9748
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037BA47C
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
conjugal transfer protein TraR
SCN18_10_11_15_R1_B_scaffold_1704_10
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9883..10755
DNA (873bp) protein (291aa)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
S-adenosylmethionine synthetase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SE07_9RHIZ
S-adenosylmethionine synthetase
Displaying 10 items

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