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SCN18_10_11_15_R1_B_scaffold_2114

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R1_B_scaffold_2114_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..952
DNA (951bp) protein (317aa)
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
Anthranilate phosphoribosyltransferase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SFN5_9RHIZ
SCN18_10_11_15_R1_B_scaffold_2114_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(958..4164)
DNA (3207bp) protein (1069aa)
Pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:AHB49421.1}; EC=1.2.1.88 {ECO:0000313|EMBL:AHB49421.1};; EC=1.5.99.8 {ECO:0000313|EMBL:AHB49421.1};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12 1.5.99.8)
Pyrroline-5-carboxylate dehydrogenase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SEX9_9RHIZ
SCN18_10_11_15_R1_B_scaffold_2114_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4325..5488)
DNA (1164bp) protein (388aa)
Protein TolA n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JFS8_HYPSM
protein TolA
Protein TolA {ECO:0000313|EMBL:CCB64246.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_10_11_15_R1_B_scaffold_2114_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5493..5960)
DNA (468bp) protein (156aa)
Biopolymer transporter ExbD n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SED5_9RHIZ
biopolymer transporter ExbD
Biopolymer transporter ExbD {ECO:0000313|EMBL:AHB48415.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCN18_10_11_15_R1_B_scaffold_2114_5
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5988..6707)
DNA (720bp) protein (240aa)
Protein TolQ n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BE68_9RHIZ
protein TolQ
Protein TolQ {ECO:0000313|EMBL:AGK58816.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_10_11_15_R1_B_scaffold_2114_6
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6991..7461)
DNA (471bp) protein (157aa)
Tol-pal system-associated acyl-CoA thioesterase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JS12_HYPDA
tol-pal system-associated acyl-CoA thioesterase
Tol-pal system-associated acyl-CoA thioesterase {ECO:0000313|EMBL:ADJ24230.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCN18_10_11_15_R1_B_scaffold_2114_7
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7454..8365)
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037D1CFC
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ACL60355.1}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCN18_10_11_15_R1_B_scaffold_2114_8
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8419..9093)
DNA (675bp) protein (225aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JS14_HYPDA
Holliday junction DNA helicase RuvB
Displaying 8 items

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