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SCN18_10_11_15_R1_P_scaffold_4

Search features with annotation key words

Displaying items 1-30 of 737 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R1_P_scaffold_4_1
unknown

Not on your lists

3..92
DNA (90bp) protein (30aa)

This feature has no annotations

SCN18_10_11_15_R1_P_scaffold_4_2
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(354..656)
DNA (303bp) protein (101aa)
Uncharacterized protein {ECO:0000313|EMBL:KJL33441.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
SCN18_10_11_15_R1_P_scaffold_4_3
unknown

Not on your lists

comp(901..1260)
DNA (360bp) protein (120aa)

This feature has no annotations

SCN18_10_11_15_R1_P_scaffold_4_4
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1847..1999
DNA (153bp) protein (51aa)
Uncharacterized protein {ECO:0000313|EMBL:KJL26212.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
SCN18_10_11_15_R1_P_scaffold_4_5
unknown

Not on your lists

comp(2002..2388)
DNA (387bp) protein (129aa)

This feature has no annotations

SCN18_10_11_15_R1_P_scaffold_4_trna_13
unknown

Not on your lists

comp(2674..2745)
DNA (72bp)
transferRNA Val
SCN18_10_11_15_R1_P_scaffold_4_trna_12
unknown

Not on your lists

comp(2775..2845)
DNA (71bp)
transferRNA Cys
SCN18_10_11_15_R1_P_scaffold_4_trna_11
unknown

Not on your lists

comp(2897..2969)
DNA (73bp)
transferRNA Gly
SCN18_10_11_15_R1_P_scaffold_4_6
SCN_Clostridium_9x, SCN_Clostridium_9x, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3111..4016
DNA (906bp) protein (302aa)
Bacterial transcription activator, effector-binding domain protein n=1 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6X4Z1_PROPF
Multidrug-efflux transporter 1 regulator {ECO:0000313|EMBL:KJL18821.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
bacterial transcription activator, effector-binding domain protein
SCN18_10_11_15_R1_P_scaffold_4_7
Chlamydia sp. 'Rubis'_SCNPILOT_EXPT_500_P_Chlamydiales_33_8, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

4135..4491
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037ADE94
Glyoxalase-like domain protein {ECO:0000313|EMBL:KJL18820.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hydroxylase
SCN18_10_11_15_R1_P_scaffold_4_8
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4515..5309)
DNA (795bp) protein (265aa)
(S)-1-Phenylethanol dehydrogenase {ECO:0000313|EMBL:KJL18819.1}; EC=1.1.1.311 {ECO:0000313|EMBL:KJL18819.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
short-chain dehydrogenase n=1 Tax=Agromyces subbeticus RepID=UPI0003B54FCC
oxidoreductase, short chain dehydrogenase/reductase family
SCN18_10_11_15_R1_P_scaffold_4_9
CN-SCN_Leifsonia_139x, CN-SCN_Leifsonia_139x, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5403..5717)
DNA (315bp) protein (105aa)
ArsR family transcriptional regulator n=1 Tax=Agromyces italicus RepID=UPI0003B31B32
HTH-type transcriptional regulator CmtR {ECO:0000313|EMBL:KJL18818.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ArsR family transcriptional regulator
SCN18_10_11_15_R1_P_scaffold_4_10
CN-SCN_Leifsonia_139x, CN-SCN_Leifsonia_139x, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5714..6199)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L5A7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL18817.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
activator of Hsp90 ATPase 1 family protein
SCN18_10_11_15_R1_P_scaffold_4_trna_10
unknown

Not on your lists

comp(6295..6367)
DNA (73bp)
transferRNA Val
SCN18_10_11_15_R1_P_scaffold_4_11
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6483..8513
DNA (2031bp) protein (677aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000369E927
UvrD/REP helicase
SCN18_10_11_15_R1_P_scaffold_4_12
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(8532..9722)
DNA (1191bp) protein (397aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
acetate kinase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034CBFFC
ackA; acetate kinase
SCN18_10_11_15_R1_P_scaffold_4_13
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(9719..11854)
DNA (2136bp) protein (712aa)
Phosphate acetyltransferase {ECO:0000256|PIRNR:PIRNR006107}; EC=2.3.1.8 {ECO:0000256|PIRNR:PIRNR006107};; Phosphotransacetylase {ECO:0000256|PIRNR:PIRNR006107}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
phosphate acetyltransferase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000347DF1F
phosphotransacetylase
SCN18_10_11_15_R1_P_scaffold_4_14
CN-SCN_Microbacterium_27x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(11910..12476)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E4A07A
PemK-like protein {ECO:0000313|EMBL:KJL18811.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
PemK domain-containing protein
SCN18_10_11_15_R1_P_scaffold_4_15
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(12517..13752)
DNA (1236bp) protein (412aa)
Ammonia channel protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KEG5_9MICO
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ammonia permease
SCN18_10_11_15_R1_P_scaffold_4_16
CN-SCN_Microbacterium_37x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(13925..14977)
DNA (1053bp) protein (351aa)
ATPase n=1 Tax=Microbacterium barkeri RepID=UPI00030790D4
AFG1-like ATPase {ECO:0000313|EMBL:KJL31666.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ATPase
SCN18_10_11_15_R1_P_scaffold_4_17
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15156..16049
DNA (894bp) protein (298aa)
thiosulfate sulfurtransferase n=1 Tax=Microbacterium barkeri RepID=UPI0002FAB7A9
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
thtR; rhodanese-related sulfurtransferase
SCN18_10_11_15_R1_P_scaffold_4_18
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16069..16515
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00030BF9EF
Fe-S metabolism associated domain protein {ECO:0000313|EMBL:KJL31664.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
SufE protein probably
SCN18_10_11_15_R1_P_scaffold_4_19
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(16623..17783)
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00030AB4FC
Alpha/beta hydrolase family protein {ECO:0000313|EMBL:KJL31663.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hydrolase of the alpha/beta superfamily
SCN18_10_11_15_R1_P_scaffold_4_20
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

17809..18390
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Microbacterium RepID=UPI00037F0C58
Uncharacterized protein {ECO:0000313|EMBL:KJL18805.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCN18_10_11_15_R1_P_scaffold_4_21
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18383..19579
DNA (1197bp) protein (399aa)
Ribonuclease D {ECO:0000313|EMBL:KJL31661.1}; EC=3.1.13.5 {ECO:0000313|EMBL:KJL31661.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K3Z4_9MICO
ribonuclease D
SCN18_10_11_15_R1_P_scaffold_4_22
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

19695..20900
DNA (1206bp) protein (402aa)
3-ketoacyl-CoA thiolase {ECO:0000313|EMBL:KJL31660.1}; EC=2.3.1.16 {ECO:0000313|EMBL:KJL31660.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
acetyl-CoA acetyltransferase n=1 Tax=Microbacterium barkeri RepID=UPI0002EC468A
atoB; acetyl-CoA acetyltransferase
SCN18_10_11_15_R1_P_scaffold_4_23
CN-SCN_Microbacterium_37x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

20909..23053
DNA (2145bp) protein (715aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034CA206
Fatty acid oxidation complex subunit alpha {ECO:0000313|EMBL:KJL18802.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
fadB; 3-hydroxyacyl-CoA dehydrogenase
SCN18_10_11_15_R1_P_scaffold_4_24
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(23250..24890)
DNA (1641bp) protein (547aa)
Cholesterol oxidase {ECO:0000313|EMBL:KJL18801.1}; EC=1.1.3.6 {ECO:0000313|EMBL:KJL18801.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003472D23
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
SCN18_10_11_15_R1_P_scaffold_4_25
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(24895..25791)
DNA (897bp) protein (299aa)
Diacylglycerol kinase {ECO:0000313|EMBL:KJL18800.1}; EC=2.7.1.107 {ECO:0000313|EMBL:KJL18800.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034595ED
diacylglycerol kinase
SCN18_10_11_15_R1_P_scaffold_4_26
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(25796..27418)
DNA (1623bp) protein (541aa)
Putative FAD-linked oxidoreductase {ECO:0000313|EMBL:KJL18799.1}; EC=1.-.-.- {ECO:0000313|EMBL:KJL18799.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
alkylglycerone-phosphate synthase (EC:2.5.1.26)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002DA00FF
Displaying items 1-30 of 737 in total

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