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SCN18_10_11_15_R1_P_scaffold_10

Search features with annotation key words

Displaying items 1-30 of 564 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R1_P_scaffold_10_1
CN-SCN_Microbacterium_27x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(347..775)
DNA (429bp) protein (143aa)
Uncharacterized protein {ECO:0000313|EMBL:KJL20497.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
SCN18_10_11_15_R1_P_scaffold_10_2
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

1066..1554
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000347074B
Uncharacterized protein {ECO:0000313|EMBL:KJL35208.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCN18_10_11_15_R1_P_scaffold_10_3
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(1622..1969)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003497136
Uncharacterized protein {ECO:0000313|EMBL:KJL35209.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
SCN18_10_11_15_R1_P_scaffold_10_4
SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2085..2453)
DNA (369bp) protein (123aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UH45_CELFN
Pyridoxamine 5'-phosphate oxidase {ECO:0000313|EMBL:KJL35210.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
SCN18_10_11_15_R1_P_scaffold_10_5
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(2565..4256)
DNA (1692bp) protein (564aa)
Biuret hydrolase {ECO:0000313|EMBL:KJL35211.1}; EC=3.5.1.84 {ECO:0000313|EMBL:KJL35211.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Amidase n=1 Tax=Brevibacterium casei S18 RepID=K9AL28_9MICO
amidase
SCN18_10_11_15_R1_P_scaffold_10_6
CN-SCN_Microbacterium_37x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(4359..5393)
DNA (1035bp) protein (345aa)
Putative agmatine deiminase {ECO:0000313|EMBL:KJL39047.1}; EC=3.5.3.12 {ECO:0000313|EMBL:KJL39047.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Agmatine deiminase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KER2_9MICO
hypothetical protein
SCN18_10_11_15_R1_P_scaffold_10_7
CN-SCN_Microbacterium_37x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

5462..6058
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034CA187
HTH-type transcriptional regulator BetI {ECO:0000313|EMBL:KJL35902.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
TetR family transcriptional regulator
SCN18_10_11_15_R1_P_scaffold_10_8
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(6101..6736)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XPJ4_MICPN
Leucobacter komagatae strain VKM ST2845 L_komagatae_20, whole genome shotgun sequence {ECO:0000313|EMBL:KIP51875.1}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;"
hypothetical protein
SCN18_10_11_15_R1_P_scaffold_10_9
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(6733..8193)
DNA (1461bp) protein (487aa)
allantoin permease n=1 Tax=Microbacterium barkeri RepID=UPI00032577AC
Permease for cytosine/purine, uracil, thiamine, allantoin {ECO:0000313|EMBL:KJL26036.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
purine-cytosine permease-like transporter
SCN18_10_11_15_R1_P_scaffold_10_10
CN-SCN_Microbacterium_37x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

8417..9790
DNA (1374bp) protein (458aa)
L-2,4-diaminobutyrate decarboxylase {ECO:0000313|EMBL:KJL34508.1}; EC=4.1.1.86 {ECO:0000313|EMBL:KJL34508.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349AEAC
L-2,4-diaminobutyrate decarboxylase
SCN18_10_11_15_R1_P_scaffold_10_11
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(9934..11220)
DNA (1287bp) protein (429aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003262C3A
aspartyl aminopeptidase
SCN18_10_11_15_R1_P_scaffold_10_12
SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11443..13725
DNA (2283bp) protein (761aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Putative superfamily I DNA and RNA helicase n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8LGY3_FRASN
superfamily I DNA and RNA helicase
SCN18_10_11_15_R1_P_scaffold_10_13
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(13756..14760)
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034D31BF
Helix-turn-helix domain protein {ECO:0000313|EMBL:KJL26032.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ArsR family transcriptional regulator
SCN18_10_11_15_R1_P_scaffold_10_14
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

14840..15196
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KBW6_9MICO
Cupin domain protein {ECO:0000313|EMBL:KJL34512.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
cupin
SCN18_10_11_15_R1_P_scaffold_10_15
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15220..15513
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Gordonia malaquae NBRC 108250 RepID=M3VCF5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJL34513.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCN18_10_11_15_R1_P_scaffold_10_16
SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15551..16198
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002DC50E8
Uncharacterized protein {ECO:0000313|EMBL:KJL26029.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
deaminase/reductase
SCN18_10_11_15_R1_P_scaffold_10_17
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(16301..16612)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KEL1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL34515.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
small-conductance mechanosensitive channel
SCN18_10_11_15_R1_P_scaffold_10_18
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

16781..17128
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034DB3E3
Uncharacterized protein {ECO:0000313|EMBL:KJL34516.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase
SCN18_10_11_15_R1_P_scaffold_10_19
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

17125..18744
DNA (1620bp) protein (540aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056887}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule:MF_01659};; Menaquinone biosynthesis protein MenD {ECO:0000256|HAMAP-Rule:MF_01659}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KGQ6_9MICO
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
SCN18_10_11_15_R1_P_scaffold_10_20
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

18908..19765
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KBT8_9MICO
Polyphosphate kinase 2 (PPK2) {ECO:0000313|EMBL:KJL26025.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCN18_10_11_15_R1_P_scaffold_10_21
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(19787..21076)
DNA (1290bp) protein (430aa)
Isochorismate synthase DhbC {ECO:0000313|EMBL:KJL34394.1}; EC=5.4.4.2 {ECO:0000313|EMBL:KJL34394.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034DC9DF
isochorismate synthase
SCN18_10_11_15_R1_P_scaffold_10_22
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

21288..21899
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000344B5D9
Uncharacterized protein {ECO:0000313|EMBL:KJL26023.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCN18_10_11_15_R1_P_scaffold_10_23
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

21950..22675
DNA (726bp) protein (242aa)
Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Demethylmenaquinone methyltransferase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KEJ1_9MICO
ubiE; methylase
SCN18_10_11_15_R1_P_scaffold_10_24
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

22719..23780
DNA (1062bp) protein (354aa)
Octaprenyl-diphosphate synthase {ECO:0000313|EMBL:KJL26021.1}; EC=2.5.1.90 {ECO:0000313|EMBL:KJL26021.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034685B6
geranylgeranyl pyrophosphate synthase
SCN18_10_11_15_R1_P_scaffold_10_25
CN-SCN_Microbacterium_37x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

23822..25195
DNA (1374bp) protein (458aa)
NADPH-ferredoxin reductase FprA {ECO:0000313|EMBL:KJL26020.1}; EC=1.18.1.2 {ECO:0000313|EMBL:KJL26020.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Microbacterium barkeri RepID=UPI0002F95895
frp; NADPH-dependent glutamate synthase beta chain
SCN18_10_11_15_R1_P_scaffold_10_26
SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25244..25681)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B69473
Uncharacterized protein {ECO:0000313|EMBL:KJL26019.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Putative secreted protein
SCN18_10_11_15_R1_P_scaffold_10_27
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

25797..26846
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000347E2E1
Alpha/beta hydrolase family protein {ECO:0000313|EMBL:KJL26018.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
lysophospholipase
SCN18_10_11_15_R1_P_scaffold_10_28
CN-SCN_Microbacterium_37x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(26956..27711)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KCM1_9MICO
HTH-type transcriptional regulator Mce2R {ECO:0000313|EMBL:KJL26017.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
transcriptional regulator
SCN18_10_11_15_R1_P_scaffold_10_29
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(27781..28269)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F2B743
UPF0234 protein RL72_01222 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCN18_10_11_15_R1_P_scaffold_10_30
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

28316..30208
DNA (1893bp) protein (631aa)
Maltodextrin glucosidase {ECO:0000313|EMBL:KJL26008.1}; EC=3.2.1.20 {ECO:0000313|EMBL:KJL26008.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003762825
alpha-amylase
Displaying items 1-30 of 564 in total

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