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SCN18_10_11_15_R1_P_scaffold_104

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Displaying items 1-30 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R1_P_scaffold_104_1
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(1..258)
DNA (258bp) protein (86aa)
Periplasmic beta-glucosidase {ECO:0000313|EMBL:KJL21811.1}; EC=3.2.1.21 {ECO:0000313|EMBL:KJL21811.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Glycosyl hydrolase family 3 protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R5Y0_LEIAQ
putative glycosyl hydrolase
SCN18_10_11_15_R1_P_scaffold_104_2
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(255..1322)
DNA (1068bp) protein (356aa)
ABC transporter, permease protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RQ05_LEIAQ
Dipeptide transport system permease protein DppC {ECO:0000313|EMBL:KJL21812.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
binding-protein-dependent transport systems inner membrane component
SCN18_10_11_15_R1_P_scaffold_104_3
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(1325..2428)
DNA (1104bp) protein (368aa)
Putative oligopeptide ABC transporter, permease protein AppB n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SZH7_LEIAQ
Nickel transport system permease protein NikB {ECO:0000313|EMBL:KJL21813.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
binding-protein-dependent transport systems inner membrane component
SCN18_10_11_15_R1_P_scaffold_104_4
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(2425..3237)
DNA (813bp) protein (271aa)
ABC transporter, ATP-binding protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T7H7_LEIAQ
Oligopeptide transport ATP-binding protein OppF {ECO:0000313|EMBL:KJL21814.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Oligopeptide transport ATP-binding protein oppD
SCN18_10_11_15_R1_P_scaffold_104_5
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(3234..4058)
DNA (825bp) protein (275aa)
Dipeptide ABC transporter, ATP-binding protein DppD family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RP84_LEIAQ
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:KJL21815.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ABC transporter
SCN18_10_11_15_R1_P_scaffold_104_6
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(4137..5804)
DNA (1668bp) protein (556aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R5X4_LEIAQ
Oligopeptide-binding protein OppA {ECO:0000313|EMBL:KJL21816.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
extracellular solute-binding protein family 5 protein
SCN18_10_11_15_R1_P_scaffold_104_7
SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5955..6620
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E87D4D
HTH-type transcriptional regulator SrpR {ECO:0000313|EMBL:KJL33423.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
TetR family transcriptional regulator
SCN18_10_11_15_R1_P_scaffold_104_8
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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6631..7845
DNA (1215bp) protein (405aa)
Putative hydrolase YxeP {ECO:0000313|EMBL:KJL33422.1}; EC=3.-.-.- {ECO:0000313|EMBL:KJL33422.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Amidohydrolase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KSR6_9MICO
metal-dependent amidase/aminoacylase/carboxypeptidase
SCN18_10_11_15_R1_P_scaffold_104_9
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(8038..8352)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P5G1_LEIXC
Transcriptional repressor FrmR {ECO:0000313|EMBL:KJL21823.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCN18_10_11_15_R1_P_scaffold_104_10
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

8433..8618
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00036186C7
Uncharacterized protein {ECO:0000313|EMBL:KJL33009.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCN18_10_11_15_R1_P_scaffold_104_11
CN-SCN_Microbacterium_27x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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8615..10312
DNA (1698bp) protein (566aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7G4_9MICO
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
SCN18_10_11_15_R1_P_scaffold_104_12
Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(10352..11329)
DNA (978bp) protein (326aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
diacylglyceryl transferase n=1 Tax=Humibacter albus RepID=UPI0003B609B5
prolipoprotein diacylglyceryl transferase
SCN18_10_11_15_R1_P_scaffold_104_13
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(11419..12111)
DNA (693bp) protein (231aa)
GTP pyrophosphokinase YwaC {ECO:0000313|EMBL:KJL21827.1}; EC=2.7.6.5 {ECO:0000313|EMBL:KJL21827.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034D147A
hypothetical protein
SCN18_10_11_15_R1_P_scaffold_104_14
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

12341..14431
DNA (2091bp) protein (697aa)
DNA-binding protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034604DF
Low-affinity putrescine importer PlaP {ECO:0000313|EMBL:KJL21828.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
amino acid transporters
SCN18_10_11_15_R1_P_scaffold_104_15
SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14530..19245
DNA (4716bp) protein (1572aa)
NAD-specific glutamate dehydrogenase {ECO:0000313|EMBL:KJL21829.1}; EC=1.4.1.2 {ECO:0000313|EMBL:KJL21829.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
NAD-glutamate dehydrogenase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C3D2_BEUC1
NAD-glutamate dehydrogenase
SCN18_10_11_15_R1_P_scaffold_104_16
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(19430..20422)
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000378A0C4
Uncharacterized protein {ECO:0000313|EMBL:KHK95352.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
SCN18_10_11_15_R1_P_scaffold_104_17
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20721..20810
DNA (90bp) protein (30aa)
Uncharacterized protein {ECO:0000313|EMBL:KJL21830.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
SCN18_10_11_15_R1_P_scaffold_104_18
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

20810..22495
DNA (1686bp) protein (562aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
potassium-transporting ATPase alpha (EC:3.6.3.12)
ATPase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003459721
SCN18_10_11_15_R1_P_scaffold_104_19
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

22492..24687
DNA (2196bp) protein (732aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
potassium-transporting ATPase subunit B n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000345F18C
kdpB; high-affinity K+ transport system, ATPase chain B
SCN18_10_11_15_R1_P_scaffold_104_20
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

24833..25474
DNA (642bp) protein (214aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
kdpC; putative potassium-transporting ATPase C chain,P-type ATPase (EC:3.6.3.12)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003625F91
SCN18_10_11_15_R1_P_scaffold_104_21
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

25493..28423
DNA (2931bp) protein (977aa)
Sensor protein KdpD {ECO:0000313|EMBL:KJL21834.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KJL21834.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Osmosensitive K+ channel histidine kinase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N7S7_MICTS
osmosensitive K+ channel histidine kinase
SCN18_10_11_15_R1_P_scaffold_104_22
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28420..29100
DNA (681bp) protein (227aa)
Fis family transcriptional regulator n=1 Tax=Microbacterium barkeri RepID=UPI0002FFDE18
KDP operon transcriptional regulatory protein KdpE {ECO:0000313|EMBL:KJL21835.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
SCN18_10_11_15_R1_P_scaffold_104_23
SCNPILOT_CONT_750_P_Burkholderiales_64_62, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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29241..30746
DNA (1506bp) protein (502aa)
Uncharacterized amino acid permease YfnA n=1 Tax=Tetrasphaera elongata Lp2 RepID=N0E4Q2_9MICO
Amino acid permease {ECO:0000313|EMBL:KHK97180.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
amino acid transporter
SCN18_10_11_15_R1_P_scaffold_104_24
CN-SCN_Microbacterium_200x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

30743..31642
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Tetrasphaera elongata Lp2 RepID=N0E604_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KHK97179.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
UspA domain-containing protein
SCN18_10_11_15_R1_P_scaffold_104_25
CN-SCN_Microbacterium_27x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

31683..33305
DNA (1623bp) protein (541aa)
FAD dependent oxidoreductase n=1 Tax=Agromyces subbeticus RepID=UPI0003B56CF0
Uncharacterized protein {ECO:0000313|EMBL:KGJ77475.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
phytoene dehydrogenase
SCN18_10_11_15_R1_P_scaffold_104_26
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(33484..35529)
DNA (2046bp) protein (682aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L330_9MICO
Iron(3+)-hydroxamate import system permease protein FhuB {ECO:0000313|EMBL:KJL33406.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
transport system permease protein
SCN18_10_11_15_R1_P_scaffold_104_27
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(35619..36644)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L0Y8_9MICO
Iron(3+)-hydroxamate-binding protein FhuD {ECO:0000313|EMBL:KJL33405.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
periplasmic binding protein
SCN18_10_11_15_R1_P_scaffold_104_28
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(36762..37619)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KPS9_9MICO
Putative siderophore transport system ATP-binding protein YusV {ECO:0000313|EMBL:KJL33404.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ABC transporter
SCN18_10_11_15_R1_P_scaffold_104_29
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

37644..38558
DNA (915bp) protein (305aa)
siderophore-interacting protein n=1 Tax=Nesterenkonia sp. F RepID=UPI000255C8B3
Vibriobactin utilization protein ViuB {ECO:0000313|EMBL:KJL33403.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Siderophore-interacting protein
SCN18_10_11_15_R1_P_scaffold_104_30
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38598..39818)
DNA (1221bp) protein (407aa)
6-aminohexanoate-dimer hydrolase {ECO:0000313|EMBL:BAA05089.1}; EC=3.5.1.46 {ECO:0000313|EMBL:BAA05089.1};; TaxID=408956 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KI723T1.;"
nylB; 6-aminohexanoate-dimer hydrolase NylB (EC:3.5.1.46)
6-aminohexanoate-dimer hydrolase n=1 Tax=Flavobacterium sp. KI723T1 RepID=Q59710_9FLAO
Displaying items 1-30 of 110 in total

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