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SCN18_10_11_15_R3_B_scaffold_528

Search features with annotation key words

Displaying items 1-30 of 152 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R3_B_scaffold_528_1
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

561..818
DNA (258bp) protein (86aa)
addiction module killer protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00037B335A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL25600.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
SCN18_10_11_15_R3_B_scaffold_528_2
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

815..1147
DNA (333bp) protein (111aa)
putative transcriptional regulator id=12492951 bin=THIO_HI species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
SCN18_10_11_15_R3_B_scaffold_528_trna_1
unknown

Not on your lists

comp(1292..1373)
DNA (82bp)
transferRNA Leu
SCN18_10_11_15_R3_B_scaffold_528_3
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1403..1759)
DNA (357bp) protein (119aa)
secG; preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG id=12492952 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
secG; preprotein translocase subunit SecG
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_10_11_15_R3_B_scaffold_528_4
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1783..2529)
DNA (747bp) protein (249aa)
tpiA; triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] id=12492953 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
tpiA; triosephosphate isomerase (EC:5.3.1.1)
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_10_11_15_R3_B_scaffold_528_5
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2615..3397)
DNA (783bp) protein (261aa)
phosphate transport system permease 1; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] id=12492954 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
phosphate transport system permease 1
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_10_11_15_R3_B_scaffold_528_6
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3416..4261)
DNA (846bp) protein (282aa)
phosphate transport system permease 2; K02038 phosphate transport system permease protein id=12492955 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
phosphate transport system permease 2
Phosphate transport system permease protein 2 {ECO:0000313|EMBL:AAZ97091.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCN18_10_11_15_R3_B_scaffold_528_7
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4267..5244)
DNA (978bp) protein (326aa)
phosphate transporter permease subunit PstC n=1 Tax=Thiobacillus thioparus RepID=UPI0003751CA7
phosphate ABC transporter permease PstC
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_10_11_15_R3_B_scaffold_528_8
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5365..6381)
DNA (1017bp) protein (339aa)
periplasmic phosphate binding protein; K02040 phosphate transport system substrate-binding protein id=12492958 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
periplasmic phosphate binding protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_10_11_15_R3_B_scaffold_528_9
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6474..7838)
DNA (1365bp) protein (455aa)
phosphoglucosamine mutase (EC:5.4.2.10); K03431 phosphoglucosamine mutase [EC:5.4.2.10] id=12492959 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
phosphoglucosamine mutase (EC:5.4.2.10)
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_10_11_15_R3_B_scaffold_528_10
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7828..7971)
DNA (144bp) protein (48aa)
SCN18_10_11_15_R3_B_scaffold_528_11
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7971..8084)
DNA (114bp) protein (38aa)
id=12492960 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria
SCN18_10_11_15_R3_B_scaffold_528_12
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8209..10101)
DNA (1893bp) protein (631aa)
membrane protease FtsH catalytic subunit (EC:3.4.24.-); K03798 cell division protease FtsH [EC:3.4.24.-] id=12492961 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
membrane protease FtsH catalytic subunit (EC:3.4.24.-)
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_10_11_15_R3_B_scaffold_528_13
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10139..10825)
DNA (687bp) protein (229aa)
cell division protein FtsJ; K02427 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] id=12492962 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cell division protein FtsJ
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_10_11_15_R3_B_scaffold_528_14
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10865..11161
DNA (297bp) protein (99aa)
hypothetical protein; K07574 RNA-binding protein id=12492963 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_10_11_15_R3_B_scaffold_528_15
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11178..11636)
DNA (459bp) protein (153aa)
hypothetical protein id=12492964 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_10_11_15_R3_B_scaffold_528_16
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11639..12115)
DNA (477bp) protein (159aa)
GreA/GreB family elongation factor; K03624 transcription elongation factor GreA id=12492965 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
GreA/GreB family elongation factor
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCN18_10_11_15_R3_B_scaffold_528_17
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12133..15252)
DNA (3120bp) protein (1040aa)
Carbamoyl-phosphate synthase large chain n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IZE0_PSEUL
carB; carbamoyl-phosphate synthase large subunit
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCN18_10_11_15_R3_B_scaffold_528_18
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15256..16395)
DNA (1140bp) protein (380aa)
carbamoyl-phosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] id=12492967 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
carbamoyl-phosphate synthase small subunit
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_10_11_15_R3_B_scaffold_528_19
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16550..17500)
DNA (951bp) protein (317aa)
dihydrodipicolinate reductase (EC:1.3.1.26); K00215 dihydrodipicolinate reductase [EC:1.3.1.26] id=12492969 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
dihydrodipicolinate reductase (EC:1.3.1.26)
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_10_11_15_R3_B_scaffold_528_20
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17497..18024)
DNA (528bp) protein (176aa)
hypothetical protein; K06186 small protein A id=12492970 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_10_11_15_R3_B_scaffold_528_21
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18690..19139
DNA (450bp) protein (150aa)
ferric uptake regulator family protein; K03711 Fur family transcriptional regulator, ferric uptake regulator id=12492971 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ferric uptake regulator family protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_10_11_15_R3_B_scaffold_528_22
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19229..19825)
DNA (597bp) protein (199aa)
alpha-ribazole-5`-phosphate phosphatase CobC; K15634 probable phosphoglycerate mutase [EC:5.4.2.1] id=12492972 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
alpha-ribazole-5'-phosphate phosphatase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_10_11_15_R3_B_scaffold_528_23
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19822..20943)
DNA (1122bp) protein (374aa)
gamma-glutamyl kinase (EC:2.7.2.11); K00931 glutamate 5-kinase [EC:2.7.2.11] id=12492973 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
gamma-glutamyl kinase (EC:2.7.2.11)
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_10_11_15_R3_B_scaffold_528_24
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20943..21449)
DNA (507bp) protein (169aa)
putative lipoprotein id=12492974 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
lipoprotein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_10_11_15_R3_B_scaffold_528_25
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21525..22019)
DNA (495bp) protein (165aa)
NAD(P)H-flavin oxidoreductase id=12492975 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
NAD(P)H-flavin oxidoreductase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_10_11_15_R3_B_scaffold_528_26
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22083..23123
DNA (1041bp) protein (347aa)
cation efflux protein id=12492976 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cation efflux protein
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_10_11_15_R3_B_scaffold_528_27
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23218..24420
DNA (1203bp) protein (401aa)
chromate transporter; K07240 chromate transporter id=12492977 bin=THIO_HI species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
chromate transporter
Chromate transporter {ECO:0000313|EMBL:KHK61772.1}; TaxID=104087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas frederiksbergensis.;"
SCN18_10_11_15_R3_B_scaffold_528_28
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24628..25230)
DNA (603bp) protein (201aa)
OmpW family protein; K07275 outer membrane protein id=12492978 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
OmpW family protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_10_11_15_R3_B_scaffold_528_29
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25484..25831)
DNA (348bp) protein (116aa)
biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD id=12492979 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Biopolymer transport protein ExbD/TolR
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying items 1-30 of 152 in total

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