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SCN18_10_11_15_R4_B_scaffold_742

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R4_B_scaffold_742_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

430..801
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3CHR2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJN06119.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_742_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

798..2075
DNA (1278bp) protein (426aa)
ECF subfamily RNA polymerase sigma-70 factor n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPP5_9RHIZ
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:CDX28375.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ECF subfamily RNA polymerase sigma-70 factor
SCN18_10_11_15_R4_B_scaffold_742_3
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2146..2622
DNA (477bp) protein (159aa)
Activator of Hsp90 ATPase-like protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11JA3_MESSB
activator of Hsp90 ATPase-like protein
Activator of Hsp90 ATPase-like protein {ECO:0000313|EMBL:ABG62522.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCN18_10_11_15_R4_B_scaffold_742_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2632..3381)
DNA (750bp) protein (250aa)
3-ketoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EHK54413.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EHK54413.1};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100)
3-ketoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXT7_9RHIZ
SCN18_10_11_15_R4_B_scaffold_742_5
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3407..4882)
DNA (1476bp) protein (492aa)
Aldehyde dehydrogenase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C843_9RHIZ
Aldehyde dehydrogenase {ECO:0000313|EMBL:EIM77995.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
aldehyde dehydrogenase
SCN18_10_11_15_R4_B_scaffold_742_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5098..6567
DNA (1470bp) protein (490aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXT4_9RHIZ
SCN18_10_11_15_R4_B_scaffold_742_7
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6571..7269
DNA (699bp) protein (233aa)
6-phosphogluconolactonase (EC:3.1.1.31)
6-phosphogluconolactonase {ECO:0000313|EMBL:ABG61563.1}; EC=3.1.1.31 {ECO:0000313|EMBL:ABG61563.1};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
6-phosphogluconolactonase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11M12_MESSB
SCN18_10_11_15_R4_B_scaffold_742_8
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7283..9097
DNA (1815bp) protein (605aa)
6-phosphogluconate dehydratase (EC:4.2.1.12)
UPI0003CE3A38 related cluster n=1 Tax=unknown RepID=UPI0003CE3A38
Phosphogluconate dehydratase {ECO:0000313|EMBL:EZQ13487.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
SCN18_10_11_15_R4_B_scaffold_742_9
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9224..10801
DNA (1578bp) protein (526aa)
diguanylate phosphodiesterase n=1 Tax=Bradyrhizobium japonicum RepID=UPI000367CA0B
Diguanylate phosphodiesterase {ECO:0000313|EMBL:KJC36268.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_742_10
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10803..11225)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZQV0_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM88575.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCN18_10_11_15_R4_B_scaffold_742_11
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11347..13110)
DNA (1764bp) protein (588aa)
von Willebrand factor type A domain protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R5Z2_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KCZ58878.1}; TaxID=1280947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas chukchiensis.;"
von Willebrand factor A
SCN18_10_11_15_R4_B_scaffold_742_12
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13324..14760
DNA (1437bp) protein (479aa)
Cytochrome bd quinol oxidase subunit 1 apoprotein {ECO:0000313|EMBL:ABG65433.1}; EC=1.10.3.- {ECO:0000313|EMBL:ABG65433.1};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Cytochrome bd quinol oxidase subunit 1 apoprotein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11AZ2_MESSB
cytochrome bd ubiquinol oxidase, subunit I
SCN18_10_11_15_R4_B_scaffold_742_13
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14765..15769
DNA (1005bp) protein (335aa)
Cytochrome bd quinol oxidase subunit 2 apoprotein {ECO:0000313|EMBL:ABG65432.1}; EC=1.10.3.- {ECO:0000313|EMBL:ABG65432.1};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Cytochrome bd quinol oxidase subunit 2 apoprotein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11AZ3_MESSB
cytochrome d ubiquinol oxidase, subunit II
SCN18_10_11_15_R4_B_scaffold_742_14
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15827..16306)
DNA (480bp) protein (160aa)
DoxX n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11E83_MESSB
Uncharacterized protein {ECO:0000313|EMBL:KFE33806.1}; TaxID=1317124 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. 13D2W-2.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_742_15
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16413..17375)
DNA (963bp) protein (321aa)
Transcriptional regulator, AraC family n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EX78_9RHIZ
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CCV08590.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
transcriptional regulator
SCN18_10_11_15_R4_B_scaffold_742_16
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17513..18718
DNA (1206bp) protein (402aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ABQ69982.1}; EC=2.3.1.16 {ECO:0000313|EMBL:ABQ69982.1};; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000370EC5D
SCN18_10_11_15_R4_B_scaffold_742_17
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18742..19500)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003688410
TetR family transcriptional regulator
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:BAH51679.1}; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
SCN18_10_11_15_R4_B_scaffold_742_18
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19646..20521)
DNA (876bp) protein (292aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:EWC63802.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EWC63802.1};; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036AA7D8
2-hydroxycyclohexanecarboxyl-CoA dehydrogenase
SCN18_10_11_15_R4_B_scaffold_742_19
SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20664..21764
DNA (1101bp) protein (367aa)
2-nitropropane dioxygenase (EC:1.13.12.16)
2-nitropropane dioxygenase NPD {ECO:0000313|EMBL:AFQ50473.1}; EC=1.13.12.16 {ECO:0000313|EMBL:AFQ50473.1};; TaxID=1009846 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia GG4.;"
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000371621C
SCN18_10_11_15_R4_B_scaffold_742_20
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21761..22525
DNA (765bp) protein (255aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:EGC97980.1}; EC=4.2.1.17 {ECO:0000313|EMBL:EGC97980.1};; TaxID=987057 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. TJI49.;"
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003795C38
enoyl-CoA hydratase/isomerase family protein
SCN18_10_11_15_R4_B_scaffold_742_21
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22539..23327
DNA (789bp) protein (263aa)
3-oxoacyl-acyl-carrier protein reductase {ECO:0000313|EMBL:ELS27321.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ELS27321.1};; TaxID=1149133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes KF707.;"
short chain dehydrogenase (EC:1.1.1.100)
short-chain dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI000376F033
SCN18_10_11_15_R4_B_scaffold_742_22
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23329..23790
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003817CAC
Acyl dehydratase {ECO:0000313|EMBL:EDY63524.1}; TaxID=457429 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespiralis ATCC 25486.;"
MaoC-like dehydratase
SCN18_10_11_15_R4_B_scaffold_742_23
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23978..25021)
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037C98AE
Uncharacterized protein {ECO:0000313|EMBL:EPZ14932.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
LuxR family transcriptional regulator
SCN18_10_11_15_R4_B_scaffold_742_24
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25360..26307
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037DCCBF
aldo/keto reductase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
SCN18_10_11_15_R4_B_scaffold_742_25
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26450..27346
DNA (897bp) protein (299aa)
enoyl-CoA hydratase (EC:4.2.1.17)
enoyl-CoA hydratase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EC8967
Enoyl-CoA hydratase {ECO:0000313|EMBL:EQB13572.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
SCN18_10_11_15_R4_B_scaffold_742_26
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27584..28744
DNA (1161bp) protein (387aa)
acyl-CoA dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI000381244C
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AJP71223.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_10_11_15_R4_B_scaffold_742_27
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28763..29062
DNA (300bp) protein (100aa)
Short-chain-acyl-CoA dehydrogenase {ECO:0000313|EMBL:GAO53552.1}; EC=1.3.8.1 {ECO:0000313|EMBL:GAO53552.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D6B845
acyl-CoA dehydrogenase domain-containing protein
Displaying 27 items

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