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SCN18_10_11_15_R4_B_scaffold_920

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R4_B_scaffold_920_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36..977)
DNA (942bp) protein (314aa)
UPI0003CE4B4B related cluster n=1 Tax=unknown RepID=UPI0003CE4B4B
Uncharacterized protein {ECO:0000313|EMBL:ESY73686.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_920_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1225..2283)
DNA (1059bp) protein (353aa)
UPI0003CED06E related cluster n=1 Tax=unknown RepID=UPI0003CED06E
DNA primase {ECO:0000313|EMBL:ESY73687.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_920_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2296..6978)
DNA (4683bp) protein (1561aa)
Methylase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FBC8_9RHIZ
Probably methylase/helicase {ECO:0000313|EMBL:AID34362.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
putative methylase/helicase
SCN18_10_11_15_R4_B_scaffold_920_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7104..7511
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11N71_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG61137.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCN18_10_11_15_R4_B_scaffold_920_5
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7562..7984)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11N73_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG61135.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCN18_10_11_15_R4_B_scaffold_920_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8103..9107)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=2 Tax=Sphingobium RepID=D4Z972_SPHJU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI99154.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
SCN18_10_11_15_R4_B_scaffold_920_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9175..9555)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FIX0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV16365.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
SCN18_10_11_15_R4_B_scaffold_920_8
unknown

Not on your lists

9686..10597
DNA (912bp) protein (304aa)

This feature has no annotations

SCN18_10_11_15_R4_B_scaffold_920_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10512..10937)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C7Z4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EXL04965.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
SCN18_10_11_15_R4_B_scaffold_920_10
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10921..11550)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FMK2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV16369.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_920_11
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11637..12017)
DNA (381bp) protein (127aa)
UPI0003CDF804 related cluster n=1 Tax=unknown RepID=UPI0003CDF804
Uncharacterized protein {ECO:0000313|EMBL:ESY78538.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_920_12
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12102..12563)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11N77_MESSB
Uncharacterized protein {ECO:0000313|EMBL:EXL04895.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_920_13
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12638..14788)
DNA (2151bp) protein (717aa)
UPI0003CE0711 related cluster n=1 Tax=unknown RepID=UPI0003CE0711
DNA-binding protein {ECO:0000313|EMBL:ESY73695.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
ParB-like nuclease
SCN18_10_11_15_R4_B_scaffold_920_14
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14906..15106)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FJK3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EZQ14613.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
SCN18_10_11_15_R4_B_scaffold_920_15
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15103..15384)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HPX1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB15107.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_920_16
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15368..15979)
DNA (612bp) protein (204aa)
UPI0003CFE4B0 related cluster n=1 Tax=unknown RepID=UPI0003CFE4B0
Uncharacterized protein {ECO:0000313|EMBL:ESZ10992.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
SCN18_10_11_15_R4_B_scaffold_920_17
CN-SCN_Plasmid_116x, CN-SCN_Plasmid_116x, CN-SCN_Plasmid_116x, CN-SCN_Plasmid_116x, CN-SCN_Plasmid_116x, Mobile_element

Not on your lists

16159..17124
DNA (966bp) protein (322aa)
arsenic resistance protein n=1 Tax=Curvibacter lanceolatus RepID=UPI0003697A93
Arsenic resistance protein {ECO:0000313|EMBL:ETR79381.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
arsenite efflux pump ACR3 and related permease
SCN18_10_11_15_R4_B_scaffold_920_18
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17129..17578)
DNA (450bp) protein (150aa)
Putative transcriptional regulator, MerR family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BAP3_PARDP
MerR family transcriptional regulator {ECO:0000313|EMBL:ETR79380.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
MerR family transcriptional regulator
SCN18_10_11_15_R4_B_scaffold_920_19
SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_363, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17651..18235
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BAP4_PARDP
Uncharacterized protein {ECO:0000313|EMBL:ETR79379.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_920_20
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18256..18639
DNA (384bp) protein (128aa)
Thioredoxin domain-containing protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CEA9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ETR79378.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
thioredoxin-like protein
SCN18_10_11_15_R4_B_scaffold_920_21
SCN_Rubrivivax_15x, SCN_Rubrivivax_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18639..19352
DNA (714bp) protein (238aa)
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Methylobacterium extorquens (strain PA1) RepID=A9VWN8_METEP
Cytochrome C biogenesis protein {ECO:0000313|EMBL:ETR79377.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
ccdA; Cytochrome c-type biogenesis protein CcdA
SCN18_10_11_15_R4_B_scaffold_920_22
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

Not on your lists

19413..19907
DNA (495bp) protein (165aa)
OsmC family protein; K04063 osmotically inducible protein OsmC id=12555223 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
OsmC-like protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
SCN18_10_11_15_R4_B_scaffold_920_23
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20005..20193)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ESW4_BRASB
hypothetical protein
Single-stranded DNA endonuclease {ECO:0000313|EMBL:KIZ44514.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
SCN18_10_11_15_R4_B_scaffold_920_24
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20348..21544)
DNA (1197bp) protein (399aa)
UPI0003CFAF38 related cluster n=1 Tax=unknown RepID=UPI0003CFAF38
Uncharacterized protein {ECO:0000313|EMBL:EZQ14530.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_920_25
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21912..23108
DNA (1197bp) protein (399aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I1G5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EZQ14531.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_920_26
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23222..23788)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11N89_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG61119.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Displaying 26 items

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