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SCN18_10_11_15_R4_P_scaffold_206

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Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R4_P_scaffold_206_1
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..646)
DNA (645bp) protein (215aa)
Bacterial regulatory protein, GntR family protein 55 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HSR3_ACHXA
Uncharacterized protein {ECO:0000313|EMBL:KJC36401.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
GntR family transcriptional regulator
SCN18_10_11_15_R4_P_scaffold_206_2
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(940..1488)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8ICT5_METNO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL57496.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCN18_10_11_15_R4_P_scaffold_206_3
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1528..2736)
DNA (1209bp) protein (403aa)
ABC transporter substrate-binding protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IFN2_XANP2
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ABS66825.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_10_11_15_R4_P_scaffold_206_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2816..3778)
DNA (963bp) protein (321aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase {ECO:0000256|RuleBase:RU910714}; Short=HIBADH {ECO:0000256|RuleBase:RU910714};; EC=1.1.1.31 {ECO:0000256|RuleBase:RU910714};; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8ICT3_METNO
SCN18_10_11_15_R4_P_scaffold_206_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3838..4743
DNA (906bp) protein (302aa)
Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8ICT1_METNO
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACL57492.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCN18_10_11_15_R4_P_scaffold_206_6
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4976..5218
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IFN4_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS66827.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_10_11_15_R4_P_scaffold_206_7
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5255..6418)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002DACBA7
ABC transporter
ABC transporter {ECO:0000313|EMBL:BAL76847.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCN18_10_11_15_R4_P_scaffold_206_8
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6550..6699)
DNA (150bp) protein (50aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q215N2_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD87904.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCN18_10_11_15_R4_P_scaffold_206_9
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7029..7391
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI000368722F
Response regulator receiver
Response regulator receiver {ECO:0000313|EMBL:AGK58632.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_10_11_15_R4_P_scaffold_206_10
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7467..7634)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V8T7_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAQ05518.1}; TaxID=314232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella vestfoldensis SKA53.;"
hypothetical protein
SCN18_10_11_15_R4_P_scaffold_206_11
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8096..8266
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000369442C
Uncharacterized protein {ECO:0000313|EMBL:CCG41180.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
CsbD family protein
SCN18_10_11_15_R4_P_scaffold_206_12
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8315..8710
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FVL9_PHAMO
Uncharacterized protein {ECO:0000313|EMBL:CCG42407.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
Protein conserved in bacteria
SCN18_10_11_15_R4_P_scaffold_206_13
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8793..13064)
DNA (4272bp) protein (1424aa)
Protein-glutamate methylesterase {ECO:0000256|SAAS:SAAS00158471}; EC=3.1.1.61 {ECO:0000256|SAAS:SAAS00158471};; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
Chemotaxis protein CheB n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B6K0_9RHIZ
chemotaxis protein CheB
SCN18_10_11_15_R4_P_scaffold_206_14
CN-SCN_Acidovorax_22x, CN-SCN_Acidovorax_22x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13543..14799
DNA (1257bp) protein (419aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IN54_XANP2
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABS69447.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_10_11_15_R4_P_scaffold_206_15
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14796..16022
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IN55_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS69448.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_10_11_15_R4_P_scaffold_206_16
CN-SCN_Acidovorax_22x, CN-SCN_Acidovorax_22x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16015..16713
DNA (699bp) protein (233aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
ABC transporter related protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A7S0_STAND
ABC transporter
SCN18_10_11_15_R4_P_scaffold_206_17
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16734..16919)
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000361F497
Uncharacterized protein {ECO:0000313|EMBL:BAR57924.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
SCN18_10_11_15_R4_P_scaffold_206_18
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17082..18422)
DNA (1341bp) protein (447aa)
ABC transporter related n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IES6_XANP2
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABS66519.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_10_11_15_R4_P_scaffold_206_19
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18434..20170)
DNA (1737bp) protein (579aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IES5_XANP2
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABS66518.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
binding-protein-dependent transport system inner membrane protein
SCN18_10_11_15_R4_P_scaffold_206_20
CN-SCN_Lautropia_89x, CN-SCN_Lautropia_89x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21015..21719)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Burkholderia bryophila RepID=UPI0003635E99
ABC transporter-like protein {ECO:0000313|EMBL:EIZ82042.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
ABC transporter-like protein
SCN18_10_11_15_R4_P_scaffold_206_21
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21716..23470)
DNA (1755bp) protein (585aa)
hypothetical protein n=1 Tax=Burkholderia bryophila RepID=UPI000381DBAD
branched-chain amino acid transport system / permease component family protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
SCN18_10_11_15_R4_P_scaffold_206_22
CN-SCN_Lautropia_89x, CN-SCN_Lautropia_89x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23483..24379)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Burkholderia bryophila RepID=UPI00037AF97A
inner-membrane translocator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
SCN18_10_11_15_R4_P_scaffold_206_23
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(24494..24748)
DNA (255bp) protein (85aa)
nucleic-acid-binding protein containing a Zn-ribbon; K07068 id=14626653 bin=bin7_NC10_sister species=Methanocaldococcus villosus genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
SCN18_10_11_15_R4_P_scaffold_206_24
CN-SCN_Lautropia_89x, CN-SCN_Lautropia_89x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24891..25685)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Burkholderia bryophila RepID=UPI0003745F70
Enoyl-CoA hydratase/carnithine racemase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
SCN18_10_11_15_R4_P_scaffold_206_25
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25718..26881)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Burkholderia bryophila RepID=UPI0003822B03
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:PAC:15706551}; TaxID=400682 species="Eukaryota; Metazoa; Porifera; Demospongiae; Haplosclerida; Niphatidae; Amphimedon.;" source="Amphimedon queenslandica (Sponge).;"
hypothetical protein
SCN18_10_11_15_R4_P_scaffold_206_26
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26878..28434)
DNA (1557bp) protein (519aa)
AMP-binding enzyme n=1 Tax=alpha proteobacterium BAL199 RepID=A8TQ05_9PROT
AMP-binding enzyme {ECO:0000313|EMBL:EDP64916.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
AMP-dependent synthetase and ligase
SCN18_10_11_15_R4_P_scaffold_206_27
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28601..29281
DNA (681bp) protein (227aa)
TetR-family transcriptional regulator n=1 Tax=Marinobacter sp. ELB17 RepID=A3JFB8_9ALTE
TetR-family transcriptional regulator {ECO:0000313|EMBL:EAZ99058.1}; TaxID=270374 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp. ELB17.;"
hypothetical protein
SCN18_10_11_15_R4_P_scaffold_206_28
CN-SCN_Acidovorax_22x, CN-SCN_Acidovorax_22x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29296..30456)
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=Burkholderia bryophila RepID=UPI0003636EB6
ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
SCN18_10_11_15_R4_P_scaffold_206_trna_1
unknown

Not on your lists

comp(30865..30938)
DNA (74bp)
transferRNA His
SCN18_10_11_15_R4_P_scaffold_206_29
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31109..31309)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IMP5_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS69288.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Displaying items 1-30 of 74 in total

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