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SCN18_10_11_15_R4_P_scaffold_386

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R4_P_scaffold_386_1
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1726
DNA (1725bp) protein (575aa)
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V7P6_SPHWW
hydrophobe/amphiphile efflux-1 (HAE1) family protein
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family {ECO:0000313|EMBL:ABQ68312.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCN18_10_11_15_R4_P_scaffold_386_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1731..2312)
DNA (582bp) protein (194aa)
Cytochrome B561 n=1 Tax=Rhizobium sp. Pop5 RepID=K0W6I8_9RHIZ
Cytochrome B561 {ECO:0000313|EMBL:KGF68307.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
cytochrome B561
SCN18_10_11_15_R4_P_scaffold_386_3
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2362..2901)
DNA (540bp) protein (180aa)
GCN5-related N-acetyltransferase n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3Q8R5_RHOPT
Uncharacterized protein {ECO:0000313|EMBL:KJB93455.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
N-acetyltransferase GCN5
SCN18_10_11_15_R4_P_scaffold_386_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3241..3909
DNA (669bp) protein (223aa)
Two-component response regulator n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IL39_AZOC5
two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:BAF89983.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCN18_10_11_15_R4_P_scaffold_386_5
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3906..5234
DNA (1329bp) protein (443aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IL42_AZOC5
sensor signal transduction histidine kinase
SCN18_10_11_15_R4_P_scaffold_386_6
unknown

Not on your lists

5317..5622
DNA (306bp) protein (102aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_386_7
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5683..7374
DNA (1692bp) protein (564aa)
ABC-type siderophore export system n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IL47_AZOC5
siderophore ABC transporter
ABC-type siderophore export system {ECO:0000313|EMBL:BAF89986.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCN18_10_11_15_R4_P_scaffold_386_8
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7516..8949
DNA (1434bp) protein (478aa)
Outer membrane efflux family protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IL62_AZOC5
outer membrane efflux family protein
Outer membrane efflux family protein {ECO:0000313|EMBL:BAF89991.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCN18_10_11_15_R4_P_scaffold_386_9
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8949..10079
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IL64_AZOC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF89992.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCN18_10_11_15_R4_P_scaffold_386_10
SCNPILOT_EXPT_750_BF_Rhodanobacter_67_8_fragment, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10076..10801
DNA (726bp) protein (242aa)
ABC transporter ATP-binding protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IL67_AZOC5
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAF89993.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCN18_10_11_15_R4_P_scaffold_386_11
Rhodanobacter denitrificans_SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_69_165, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10798..11715
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IL70_AZOC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF89994.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCN18_10_11_15_R4_P_scaffold_386_12
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11803..12120
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EPI8_METSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK50193.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCN18_10_11_15_R4_P_scaffold_386_13
SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12117..13334
DNA (1218bp) protein (406aa)
Beta-ketoacyl synthase n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QJS9_METTR
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000313|EMBL:CEJ10514.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
beta-ketoacyl synthase
SCN18_10_11_15_R4_P_scaffold_386_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13343..14062
DNA (720bp) protein (240aa)
Phosphatase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P1P3_AZOS1
phosphatase
Phosphatase {ECO:0000313|EMBL:BAI74572.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
SCN18_10_11_15_R4_P_scaffold_386_15
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14055..15497
DNA (1443bp) protein (481aa)
Aminotransferase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I3R4_AZOC5
aminotransferase
Aminotransferase {ECO:0000313|EMBL:BAF87643.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCN18_10_11_15_R4_P_scaffold_386_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15512..16435
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM17 RepID=J3EB32_9PSED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKA22827.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlororaphis.;"
SCN18_10_11_15_R4_P_scaffold_386_17
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16432..17337
DNA (906bp) protein (302aa)
Putative esterase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IL59_AZOC5
esterase
Putative esterase {ECO:0000313|EMBL:BAF89990.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCN18_10_11_15_R4_P_scaffold_386_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17334..18500
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002D295D8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI74569.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
SCN18_10_11_15_R4_P_scaffold_386_19
SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, Phage

Not on your lists

19358..19546
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Enterobacter asburiae (strain LF7a) RepID=G2S374_ENTAL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN65808.1}; TaxID=640513 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter asburiae (strain LF7a).;"
SCN18_10_11_15_R4_P_scaffold_386_20
unknown

Not on your lists

19549..19809
DNA (261bp) protein (87aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_386_21
unknown

Not on your lists

comp(19838..20083)
DNA (246bp) protein (82aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_386_22
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20101..20307)
DNA (207bp) protein (69aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
FMN-dependent NADH-azoreductase n=1 Tax=Caulobacter sp. AP07 RepID=J2H768_9CAUL
NAD(P)H dehydrogenase (quinone)
SCN18_10_11_15_R4_P_scaffold_386_23
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20252..21085)
DNA (834bp) protein (278aa)
Putative transmembrane protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK54_OLICO
transporter
Putative transmembrane protein {ECO:0000313|EMBL:AEI08306.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_10_11_15_R4_P_scaffold_386_24
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21121..21237)
DNA (117bp) protein (39aa)
SCN18_10_11_15_R4_P_scaffold_386_25
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21259..22716)
DNA (1458bp) protein (486aa)
Multicopper oxidase type 2 n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IKU4_XANP2
multicopper oxidase type 2
Multicopper oxidase type 2 {ECO:0000313|EMBL:ABS68637.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_10_11_15_R4_P_scaffold_386_26
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22775..23149)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IKU3_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS68636.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_10_11_15_R4_P_scaffold_386_27
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23161..26292)
DNA (3132bp) protein (1044aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IKU2_XANP2
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:ABS68635.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
CzcA family heavy metal efflux protein
SCN18_10_11_15_R4_P_scaffold_386_28
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26302..27945)
DNA (1644bp) protein (548aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IKU1_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS68634.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_10_11_15_R4_P_scaffold_386_29
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28024..29346)
DNA (1323bp) protein (441aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IKU0_XANP2
integral membrane sensor signal transduction histidine kinase
SCN18_10_11_15_R4_P_scaffold_386_30
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29343..30056)
DNA (714bp) protein (238aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IKT9_XANP2
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABS68632.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Displaying items 1-30 of 39 in total

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