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SCN18_10_11_15_R4_P_scaffold_82

Search features with annotation key words

Displaying items 1-30 of 218 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R4_P_scaffold_82_1
unknown

Not on your lists

comp(1..63)
DNA (63bp) protein (21aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_82_2
unknown

Not on your lists

188..283
DNA (96bp) protein (32aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_82_3
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

280..1713
DNA (1434bp) protein (478aa)
putative indolepyruvate oxidoreductase subunit B (EC:1.2.7.8)
Ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2WAZ1_MAGSA
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_82_4
SCN_Rubrivivax_15x, SCN_Rubrivivax_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1710..2123
DNA (414bp) protein (138aa)
Phenylacetic acid degradation protein PaaD n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L9I5_9BACI
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_82_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2125..2544
DNA (420bp) protein (140aa)
Possible 4-hydroxybenzoyl-CoA thioesterase n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N8W5_RHOPA
4-hydroxybenzoyl-CoA thioesterase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_82_6
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

2607..3770
DNA (1164bp) protein (388aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2FTE3_9GAMM
2-hydroxypropyl-CoM lyase {ECO:0000313|EMBL:CEJ13104.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
methionine synthase II (cobalamin-independent)-like protein
SCN18_10_11_15_R4_P_scaffold_82_7
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4044..5381)
DNA (1338bp) protein (446aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037A1D01
DegT/DnrJ/EryC1/StrS aminotransferase
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:AHI24760.1}; TaxID=1296990 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter xylinus E25.;"
SCN18_10_11_15_R4_P_scaffold_82_8
SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5368..6810)
DNA (1443bp) protein (481aa)
Putative DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Roseburia sp. CAG:100 RepID=R7R243_9FIRM
Aminotransferase DegT {ECO:0000313|EMBL:EZQ15529.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
putative aminotransferase
SCN18_10_11_15_R4_P_scaffold_82_9
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7009..8280
DNA (1272bp) protein (424aa)
Glycosyltransferase n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y1G3_9PROT
glycosyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_82_10
Nitrosospira multiformis_SCNPILOT_SOLID_1_TRIM150_Nitrosospira_54_27, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8204..9043)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 360MFTsu5.1 RepID=UPI000375D380
FkbM family methyltransferase {ECO:0000313|EMBL:EKE77328.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
FkbM family methyltransferase
SCN18_10_11_15_R4_P_scaffold_82_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9121..10716)
DNA (1596bp) protein (532aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TRG3_9PROT
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:EDP64527.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
glucose-methanol-choline oxidoreductase
SCN18_10_11_15_R4_P_scaffold_82_12
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10885..14073
DNA (3189bp) protein (1063aa)
RagC protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TJE6_9BRAD
RagC protein {ECO:0000313|EMBL:CCE06584.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
ragC; cation efflux protein
SCN18_10_11_15_R4_P_scaffold_82_13
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14063..15232
DNA (1170bp) protein (390aa)
RND family efflux transporter, MFP subunit n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CKR3_9BRAD
RND transporter MFP subunit
RND transporter MFP subunit {ECO:0000313|EMBL:AJP48495.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
SCN18_10_11_15_R4_P_scaffold_82_14
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15280..15930
DNA (651bp) protein (217aa)
UPI0003CEB9FF related cluster n=1 Tax=unknown RepID=UPI0003CEB9FF
von Willebrand factor type A {ECO:0000313|EMBL:KKB84715.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein
SCN18_10_11_15_R4_P_scaffold_82_15
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15930..16709
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FBL8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX63820.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
Serine/threonine phosphoprotein phosphatase
SCN18_10_11_15_R4_P_scaffold_82_16
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16706..18349
DNA (1644bp) protein (548aa)
UPI0003CF2FC6 related cluster n=1 Tax=unknown RepID=UPI0003CF2FC6
Uncharacterized protein {ECO:0000313|EMBL:CDX34690.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCN18_10_11_15_R4_P_scaffold_82_17
SCNpilot_BF_INOC_Bacteroidetes_37_82, SCNpilot_BF_INOC_Bacteroidetes_37_82, SCNpilot_BF_INOC_Bacteroidetes_37_82, SCNpilot_BF_INOC_Bacteroidetes_37_82, Bacteroidetes, Bacteria

Not on your lists

comp(18369..19223)
DNA (855bp) protein (285aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Burkholderia sp. H160 RepID=B5WC96_9BURK
Short-chain dehydrogenase {ECO:0000313|EMBL:KJC55949.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
short-chain dehydrogenase/reductase SDR
SCN18_10_11_15_R4_P_scaffold_82_18
CN-SCN_Acidovorax_22x, CN-SCN_Acidovorax_22x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19223..20416)
DNA (1194bp) protein (398aa)
Putative caiB/baiF CoA-transferase family protein Putative Formyl-CoA transferase n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YJJ8_BRASO
carnitine dehydratase
Carnitine dehydratase {ECO:0000313|EMBL:AJP47417.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
SCN18_10_11_15_R4_P_scaffold_82_19
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20474..21649
DNA (1176bp) protein (392aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07GV7_RHOP5
iron-containing alcohol dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_82_20
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21742..22596
DNA (855bp) protein (285aa)
methyltransferase n=1 Tax=Fischerella muscicola RepID=UPI0002E08552
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_82_21
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22682..23965)
DNA (1284bp) protein (428aa)
methionine gamma-lyase (EC:4.4.1.11)
UPI0003CE78CD related cluster n=1 Tax=unknown RepID=UPI0003CE78CD
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_82_22
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

Not on your lists

comp(24005..24724)
DNA (720bp) protein (240aa)
alpha/beta hydrolase n=1 Tax=Brevibacillus brevis RepID=UPI00036930F0
alpha/beta hydrolase fold protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_82_23
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24729..25580)
DNA (852bp) protein (284aa)
Dehydrogenase with different specificities, short-chain alcohol dehydrogenases like protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJ19_CHLTF
short-chain alcohol dehydrogenase-like protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_82_24
SCN_Rubrivivax_15x, SCN_Rubrivivax_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25662..27107
DNA (1446bp) protein (482aa)
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9FJ10_9CYAN
amidase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_82_25
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27231..28202)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000374EF9F
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_82_26
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28223..29011)
DNA (789bp) protein (263aa)
ABC transporter, permease component n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AEU4_AZOBR
ABC transporter permease
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_82_27
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29004..29774)
DNA (771bp) protein (257aa)
Sulfonate ABC transporter, ATP-binding protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TIC1_9PROT
nitrate ABC transporter ATP-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_82_28
Acinetobacter sp. NIPH 809_SCNpilot_P_inoc_Acinetobacter_41_9_partial, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29758..31623)
DNA (1866bp) protein (622aa)
Carbamoyl-phosphate synthase subunit L n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4X0I6_PSEDE
carbamoyl-phosphate synthase subunit L
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_82_29
SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31620..32078)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDU6_PHEZH
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_82_30
Acinetobacter sp. NIPH 809_SCNpilot_P_inoc_Acinetobacter_41_9_partial, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32081..32995)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI000369079E
enoyl-CoA hydratase/isomerase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 1-30 of 218 in total

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