ggKbase home page

SCN18_10_11_15_R4_P_scaffold_123

Search features with annotation key words

Displaying items 1-30 of 146 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R4_P_scaffold_123_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

244..2700
DNA (2457bp) protein (819aa)
FAD-dependent oxidoreductase n=1 Tax=Hoeflea sp. 108 RepID=UPI000380B8DE
glycine cleavage system T protein (aminomethyltransferase)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_123_2
SCNPILOT_CONT_750_P_Burkholderiales_64_62, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2690..3556)
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI000376E9FF
transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_123_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3629..4813
DNA (1185bp) protein (395aa)
2-aminoethylphosphonate:pyruvate aminotransferase n=1 Tax=Burkholderia sp. JPY251 RepID=UPI0003696890
2-aminoethylphosphonate--pyruvate transaminase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_123_4
SCNPILOT_CONT_750_P_Burkholderiales_64_62, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4818..6059
DNA (1242bp) protein (414aa)
Phosphonoacetate hydrolase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PFZ3_9BRAD
phosphonoacetate hydrolase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_123_5
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6061..7509
DNA (1449bp) protein (483aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PT51_9BRAD
phosphonoacetaldehyde dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_123_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7576..8400
DNA (825bp) protein (275aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YZ5_SOLUE
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_123_7
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8405..9610
DNA (1206bp) protein (402aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QGV2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ETR79072.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
major facilitator transporter
SCN18_10_11_15_R4_P_scaffold_123_8
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9723..11174
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PBD0_9BRAD
flavin-binding family monooxygenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_123_9
SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11385..12176)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035C5B76
hydratase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_123_10
SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12210..12668)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P427_9BRAD
cyclase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_123_11
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12721..13197
DNA (477bp) protein (159aa)
Transcriptional regulatory protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G8K3_9BRAD
transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_123_12
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13236..14270
DNA (1035bp) protein (345aa)
putative polyamine ABC transporter; periplasmic component; K02012 iron(III) transport system substrate-binding protein id=14632194 bin=bin9_gal15 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
putative polyamine ABC transporter; periplasmic component
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_123_13
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14267..15325
DNA (1059bp) protein (353aa)
potA; spermidine/putrescine transport system ATP-binding protein id=14632193 bin=bin9_gal15 species=Azospirillum sp. genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
potA; spermidine/putrescine transport system ATP-binding protein
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
SCN18_10_11_15_R4_P_scaffold_123_14
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15322..17010
DNA (1689bp) protein (563aa)
polyamine ABC transporter; permease component; K02011 iron(III) transport system permease protein id=14632192 bin=bin9_gal15 species=Bradyrhizobium sp. YR681 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
polyamine ABC transporter; permease component
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_123_15
unknown

Not on your lists

comp(17080..17271)
DNA (192bp) protein (64aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_123_16
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17329..18378
DNA (1050bp) protein (350aa)
Homoserine O-acetyltransferase {ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00276255};; EC=2.3.1.31 {ECO:0000256|SAAS:SAAS00070942};; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G261_9BRAD
hypothetical protein
SCN18_10_11_15_R4_P_scaffold_123_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18406..19116
DNA (711bp) protein (237aa)
Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SJF3_NEMVE
methyltransferase type 11
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
SCN18_10_11_15_R4_P_scaffold_123_18
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19113..20246
DNA (1134bp) protein (378aa)
FAD dependent oxidoreductase n=1 Tax=Oceanibaculum indicum P24 RepID=K2K677_9PROT
foxred; FAD-dependent oxidoreductase domain-containing protein 1
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_123_19
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20276..21613
DNA (1338bp) protein (446aa)
Class III aminotransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGN8_9BURK
class III aminotransferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_123_20
SCNPILOT_CONT_750_P_Burkholderiales_64_62, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21632..22615
DNA (984bp) protein (328aa)
gpuA; 3-guanidinopropionase GpuA (EC:3.5.3.17)
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI00036B8F9B
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_123_21
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22840..23475
DNA (636bp) protein (212aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
SCN18_10_11_15_R4_P_scaffold_123_22
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23506..23886)
DNA (381bp) protein (127aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UUY0_9SPHN
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ENY82099.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCN18_10_11_15_R4_P_scaffold_123_23
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23946..24437
DNA (492bp) protein (164aa)
Putative redox-sensitive transcriptional activator SoxR n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIC6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AHE56500.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
soxR; putative redox-sensitive transcriptional activator SoxR
SCN18_10_11_15_R4_P_scaffold_123_24
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24574..25758
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Ahrensia kielensis RepID=UPI00037E402B
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_123_25
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25694..26104)
DNA (411bp) protein (137aa)
Candidate membrane protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y349_RAMTT
membrane protein
Candidate membrane protein {ECO:0000313|EMBL:AEG94929.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCN18_10_11_15_R4_P_scaffold_123_26
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

comp(26104..26796)
DNA (693bp) protein (231aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6BAY3_RHILS
HAD-superfamily hydrolase, subfamily IA, variant 1
Haloacid dehalogenase superfamily enzyme, subfamily IA {ECO:0000313|EMBL:EJC72185.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
SCN18_10_11_15_R4_P_scaffold_123_27
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

comp(26793..27767)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003706B7A
Uncharacterized protein {ECO:0000313|EMBL:GAO38843.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
SCN18_10_11_15_R4_P_scaffold_123_28
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27822..28658)
DNA (837bp) protein (279aa)
Lyzozyme M1 n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9TSI8_PHAFV
Lyzozyme M1
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_10_11_15_R4_P_scaffold_123_29
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28781..29926)
DNA (1146bp) protein (382aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IQX8_RHOP2
Iron-containing alcohol dehydrogenase
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:ABD09382.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCN18_10_11_15_R4_P_scaffold_123_30
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30065..31456
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K7H9_9PROT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 1-30 of 146 in total

View Taxonomy