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SCN18_10_11_15_R4_P_scaffold_39

Search features with annotation key words

Displaying items 1-30 of 315 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R4_P_scaffold_39_1
unknown

Not on your lists

3..1154
DNA (1152bp) protein (384aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_39_2
unknown

Not on your lists

comp(1898..2230)
DNA (333bp) protein (111aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_39_3
unknown

Not on your lists

comp(2248..2418)
DNA (171bp) protein (57aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_39_4
unknown

Not on your lists

comp(2415..3032)
DNA (618bp) protein (206aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_39_5
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3143..3691
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Bacillus methanolicus PB1 RepID=I3E0U9_BACMT
Uncharacterized protein {ECO:0000313|EMBL:EIJ80120.1}; TaxID=997296 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus methanolicus PB1.;"
hypothetical protein
SCN18_10_11_15_R4_P_scaffold_39_6
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

3702..4070
DNA (369bp) protein (123aa)
Tax=BJP_08E140C01_Coriobacteriales_62_12
SCN18_10_11_15_R4_P_scaffold_39_7
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

4067..5584
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PXS6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH99735.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCN18_10_11_15_R4_P_scaffold_39_8
SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11, SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5602..6744)
DNA (1143bp) protein (381aa)
Putative uncharacterized protein id=4571195 bin=GWA2_Ignavibacteria-rel_35_8 species=Thioalkalimicrobium aerophilum genus=Thioalkalimicrobium taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein
Tax=GWA2_Bacteroidetes_31_9_curated
SCN18_10_11_15_R4_P_scaffold_39_9
SCNPILOT_EXPT_1000_BF_Niastella_42_33, SCNPILOT_EXPT_1000_BF_Niastella_42_33, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6720..8015)
DNA (1296bp) protein (432aa)
Integrase family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THP6_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC89913.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
integrase family protein
SCN18_10_11_15_R4_P_scaffold_39_10
SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11, SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8170..8700)
DNA (531bp) protein (177aa)
Resolvase, N-terminal domain protein (Fragment) n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FUQ8_9SPHI
Strain DSM 12611 Contig03, whole genome shotgun sequence {ECO:0000313|EMBL:KIO54333.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
hypothetical protein
SCN18_10_11_15_R4_P_scaffold_39_11
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9030..9365
DNA (336bp) protein (112aa)
TRAG family protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y418_9SPHI
TRAG family protein {ECO:0000313|EMBL:EHQ24754.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
type IV secretory pathway, VirD4 component
SCN18_10_11_15_R4_P_scaffold_39_12
SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, Bacteroidetes, Bacteria

Not on your lists

comp(9484..11889)
DNA (2406bp) protein (802aa)
TonB-dependent receptor, putative n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9H5A4_9SPHI
Putative TonB-dependent receptor {ECO:0000313|EMBL:GAO43953.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
SCN18_10_11_15_R4_P_scaffold_39_13
SCNPILOT_EXPT_500_BF_STEP10_Flavobacteriia_38_13, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12089..13216
DNA (1128bp) protein (376aa)
yehU_3; Sensor histidine kinase YehU (EC:2.7.13.3)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI000344DBC4
Signal transduction histidine kinase LytS {ECO:0000313|EMBL:EOR31167.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
SCN18_10_11_15_R4_P_scaffold_39_14
SCNPILOT_EXPT_500_BF_STEP10_Flavobacteriia_38_13, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13188..13895
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI000349FB8A
Chemotaxis protein CheY {ECO:0000313|EMBL:EZH75404.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
chemotaxis protein CheY
SCN18_10_11_15_R4_P_scaffold_39_15
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14645..15157)
DNA (513bp) protein (171aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9TC13_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY66428.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
SCN18_10_11_15_R4_P_scaffold_39_16
SCNpilot_P_inoc_Sphingobacteriales_44_17, SCNpilot_P_inoc_Sphingobacteriales_44_17, SCNpilot_P_inoc_Sphingobacteriales_44_17, SCNpilot_P_inoc_Sphingobacteriales_44_17, Bacteroidetes, Bacteria

Not on your lists

comp(15157..18039)
DNA (2883bp) protein (961aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae CL02T12C01 RepID=I9I0U3_9BACE
Adenine-specific methyltransferase activity Eco57IA
Tax=GWA2_Bacteroidetes_31_9_curated
SCN18_10_11_15_R4_P_scaffold_39_17
SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, Bacteroidetes, Bacteria

Not on your lists

comp(18125..18922)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI0003778F83
DNA-binding protein {ECO:0000313|EMBL:KEO73815.1}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
XRE family transcriptional regulator
SCN18_10_11_15_R4_P_scaffold_39_18
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

comp(19208..20854)
DNA (1647bp) protein (549aa)
Sucrose-6-phosphate hydrolase {ECO:0000313|EMBL:KHJ39415.1}; EC=3.2.1.26 {ECO:0000313|EMBL:KHJ39415.1};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B59E20
hypothetical protein
SCN18_10_11_15_R4_P_scaffold_39_19
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20851..22344)
DNA (1494bp) protein (498aa)
Glycosyl hydrolase family 32 n=4 Tax=Bacteroides RepID=A7V0S0_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY77219.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
glycoside hydrolase family protein
SCN18_10_11_15_R4_P_scaffold_39_20
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22356..23903)
DNA (1548bp) protein (516aa)
Glycosyl hydrolase family 32 domain protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YCJ5_9SPHI
Glycosyl hydrolase family 32 domain protein {ECO:0000313|EMBL:EHQ30673.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
glycosyl hydrolase family 32 domain protein
SCN18_10_11_15_R4_P_scaffold_39_21
SCNpilot_P_inoc_Paludibacter_47_17, SCNpilot_P_inoc_Paludibacter_47_17, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23922..25331)
DNA (1410bp) protein (470aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YCJ4_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ30672.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
PKD domain containing protein
SCN18_10_11_15_R4_P_scaffold_39_22
SCNpilot_BF_INOC_Parabacteroides_41_8, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25370..27067)
DNA (1698bp) protein (566aa)
glycan metabolism protein RagB n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029B12DC
Glycan metabolism protein RagB {ECO:0000313|EMBL:KEO75467.1}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
RagB/SusD family protein
SCN18_10_11_15_R4_P_scaffold_39_23
SCNPILOT_CONT_300_BF_Flavobacteriales_39_5_fragment, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27095..30190)
DNA (3096bp) protein (1032aa)
TonB-dependent receptor n=1 Tax=Galbibacter marinus RepID=K2PSP6_9FLAO
TonB-dependent receptor {ECO:0000313|EMBL:EKF55600.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
SusC/RagA family TonB-linked outer membrane protein
SCN18_10_11_15_R4_P_scaffold_39_24
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30195..30737)
DNA (543bp) protein (181aa)
sugar transporter (EC:1.3.1.74)
MFS transporter n=1 Tax=Dyadobacter beijingensis RepID=UPI00035E4A7E
MFS transporter {ECO:0000313|EMBL:KIC89643.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
SCN18_10_11_15_R4_P_scaffold_39_25
SCNPILOT_EXPT_1000_BF_Niastella_42_33, SCNPILOT_EXPT_1000_BF_Niastella_42_33, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31170..33782
DNA (2613bp) protein (871aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000381367E
monosaccharide ABC transporter substrate-binding protein, CUT2 family
Monosaccharide ABC transporter substrate-binding protein, CUT2 family {ECO:0000313|EMBL:AEW03308.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_10_11_15_R4_P_scaffold_39_26
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33833..34636)
DNA (804bp) protein (268aa)
hydrolase n=1 Tax=Streptomyces sp. FxanaC1 RepID=UPI00037EE017
hydrolase
Hydrolase {ECO:0000313|EMBL:EHN78112.1}; TaxID=1120227 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces coelicoflavus ZG0656.;"
SCN18_10_11_15_R4_P_scaffold_39_27
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34705..36477)
DNA (1773bp) protein (591aa)
Glycoside hydrolase family 5 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TA26_NIAKG
glycoside hydrolase family protein
Glycoside hydrolase family 5 {ECO:0000313|EMBL:AEW02398.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_10_11_15_R4_P_scaffold_39_28
CN-SCN_Cytophagaceae_12x, CN-SCN_Cytophagaceae_12x, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(36584..37966)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TD40_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98272.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_10_11_15_R4_P_scaffold_39_29
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(37980..39425)
DNA (1446bp) protein (482aa)
Oxidoreductase domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TD39_NIAKG
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:AEV98271.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_10_11_15_R4_P_scaffold_39_30
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(39565..40722)
DNA (1158bp) protein (386aa)
Oxidoreductase domain protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GLW4_9BACT
Oxidoreductase domain protein {ECO:0000313|EMBL:CCH54890.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
oxidoreductase domain-containing protein
Displaying items 1-30 of 315 in total

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