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SCN18_10_11_15_R4_P_scaffold_155

Search features with annotation key words

Displaying items 1-30 of 170 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R4_P_scaffold_155_1
unknown

Not on your lists

2..127
DNA (126bp) protein (42aa)

This feature has no annotations

SCN18_10_11_15_R4_P_scaffold_155_2
CN-SCN_Cytophagaceae_12x, CN-SCN_Cytophagaceae_12x, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

229..1524
DNA (1296bp) protein (432aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000372F312
class V aminotransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_10_11_15_R4_P_scaffold_155_3
SCNpilot_BF_INOC_Sphingobacteriales_46_9, SCNpilot_BF_INOC_Sphingobacteriales_46_9, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1661..1774)
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NUW7_9SPHI
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_10_11_15_R4_P_scaffold_155_4
SCNpilot_P_inoc_Niastella_39_19, SCNpilot_P_inoc_Niastella_39_19, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1864..2133)
DNA (270bp) protein (90aa)
Histone family protein DNA-binding protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NUW8_9SPHI
DNA-binding protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_10_11_15_R4_P_scaffold_155_5
SCNpilot_P_inoc_Niastella_39_19, SCNpilot_P_inoc_Niastella_39_19, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2434..2745)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PK46_CHIPD
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_10_11_15_R4_P_scaffold_155_6
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2742..3509)
DNA (768bp) protein (256aa)
exodeoxyribonuclease III n=1 Tax=Niabella aurantiaca RepID=UPI00036C7AB3
exodeoxyribonuclease III
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_10_11_15_R4_P_scaffold_155_7
SCNPILOT_EXPT_1000_BF_Niastella_42_33, SCNPILOT_EXPT_1000_BF_Niastella_42_33, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3514..4341
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7J2_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_10_11_15_R4_P_scaffold_155_8
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4344..5132)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7J1_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02246.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_10_11_15_R4_P_scaffold_155_9
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5165..7882)
DNA (2718bp) protein (906aa)
methionine synthase n=1 Tax=Segetibacter koreensis RepID=UPI000370C780
methionine synthase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_10_11_15_R4_P_scaffold_155_10
SCNPILOT_EXPT_1000_BF_Niastella_42_33, SCNPILOT_EXPT_1000_BF_Niastella_42_33, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7900..8916)
DNA (1017bp) protein (339aa)
5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Segetibacter koreensis RepID=UPI000382B986
methionine synthase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_10_11_15_R4_P_scaffold_155_11
Dyadobacter fermentans_SCNpilot_P_inoc_Dyadobacter_48_40, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9126..10046)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037D3516
Uncharacterized protein {ECO:0000313|EMBL:KIF31783.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
SCN18_10_11_15_R4_P_scaffold_155_12
SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, Bacteroidetes, Bacteria

Not on your lists

comp(10076..10600)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000380332C
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_10_11_15_R4_P_scaffold_155_13
SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, Bacteroidetes, Bacteria

Not on your lists

comp(10608..11051)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000374784F
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_10_11_15_R4_P_scaffold_155_14
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11124..11738)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037A11D6
DNA replication and repair protein RecR
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_10_11_15_R4_P_scaffold_155_15
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11757..13181)
DNA (1425bp) protein (475aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000372B641
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_10_11_15_R4_P_scaffold_155_16
SCNPILOT_EXPT_1000_BF_Niastella_42_33, SCNPILOT_EXPT_1000_BF_Niastella_42_33, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13212..16355)
DNA (3144bp) protein (1048aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
UvrD/REP helicase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7I6_NIAKG
UvrD/REP helicase
SCN18_10_11_15_R4_P_scaffold_155_17
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16574..18568
DNA (1995bp) protein (665aa)
Probable potassium transport system protein kup n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TA98_NIAKG
Low affinity potassium transport system protein kup
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_10_11_15_R4_P_scaffold_155_18
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18569..20260)
DNA (1692bp) protein (564aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUS5_CHIPD
PAS/PAC sensor signal transduction histidine kinase
SCN18_10_11_15_R4_P_scaffold_155_19
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20262..21395)
DNA (1134bp) protein (378aa)
Osmosensitive K channel signal transduction histidine kinase, sensor subunit KdpD n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUS6_CHIPD
Histidine kinase {ECO:0000313|EMBL:KIC96088.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
osmosensitive K channel signal transduction histidine kinase, sensor subunit KdpD
SCN18_10_11_15_R4_P_scaffold_155_20
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21408..22763)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUS2_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU61070.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCN18_10_11_15_R4_P_scaffold_155_21
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22770..23333)
DNA (564bp) protein (188aa)
potassium-transporting ATPase subunit C (EC:3.6.3.12)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003780D4C
SCN18_10_11_15_R4_P_scaffold_155_22
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23342..25405)
DNA (2064bp) protein (688aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285, ECO:0000256|SAAS:SAAS00017871};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Potassium-transporting ATPase B chain n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYG6_DYAFD
K+-transporting ATPase subunit B
SCN18_10_11_15_R4_P_scaffold_155_23
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25416..27116)
DNA (1701bp) protein (567aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
potassium-transporting ATPase subunit A n=1 Tax=Segetibacter koreensis RepID=UPI0003629DAA
potassium-transporting ATPase subunit A
SCN18_10_11_15_R4_P_scaffold_155_24
SCNPILOT_EXPT_1000_BF_Niastella_42_33, SCNPILOT_EXPT_1000_BF_Niastella_42_33, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27591..28700)
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B6DAA2
alpha/beta hydrolase
Tax=CG_OP9-01
SCN18_10_11_15_R4_P_scaffold_155_25
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28813..30162)
DNA (1350bp) protein (450aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUT4_CHIPD
Fis family transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ACU61082.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCN18_10_11_15_R4_P_scaffold_155_26
SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11, SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30218..31696)
DNA (1479bp) protein (493aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000365CA7A
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_10_11_15_R4_P_scaffold_155_27
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31737..32183)
DNA (447bp) protein (149aa)
Regulatory protein MarR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB85_NIAKG
regulatory protein MarR
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_10_11_15_R4_P_scaffold_155_28
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32279..33310)
DNA (1032bp) protein (344aa)
radical SAM protein n=1 Tax=Segetibacter koreensis RepID=UPI000363E614
radical SAM protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_10_11_15_R4_P_scaffold_155_29
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

33431..34219
DNA (789bp) protein (263aa)
Lysozyme {ECO:0000313|EMBL:AEW02471.1}; EC=3.2.1.17 {ECO:0000313|EMBL:AEW02471.1};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F1366
lysozyme
SCN18_10_11_15_R4_P_scaffold_155_30
SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_21, SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34555..34968)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003628BAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17753.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Displaying items 1-30 of 170 in total

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