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SCN18_10_11_15_R5_B_scaffold_17

Search features with annotation key words

Displaying items 1-30 of 361 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R5_B_scaffold_17_1
unknown

Not on your lists

2..127
DNA (126bp) protein (42aa)

This feature has no annotations

SCN18_10_11_15_R5_B_scaffold_17_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(272..1657)
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TRA0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KFC67583.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_10_11_15_R5_B_scaffold_17_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1806..2840)
DNA (1035bp) protein (345aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J5Z6_POLGS
cobT; Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
SCN18_10_11_15_R5_B_scaffold_17_4
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2981..3763
DNA (783bp) protein (261aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI0003601FD2
cobalamin 5'-phosphate synthase
SCN18_10_11_15_R5_B_scaffold_17_5
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3782..3970
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=Rhodobacter sphaeroides WS8N RepID=F5LXV6_RHOSH
Uncharacterized protein {ECO:0000313|EMBL:CEJ09849.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Fe-S protein
SCN18_10_11_15_R5_B_scaffold_17_6
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3967..4683
DNA (717bp) protein (239aa)
Putative transmembrane signal peptide protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A648_STAND
Uncharacterized protein {ECO:0000313|EMBL:CEJ09850.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
transmembrane signal peptide protein
SCN18_10_11_15_R5_B_scaffold_17_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4783..6309
DNA (1527bp) protein (509aa)
2'3'-cyclic-nucleotide 2'-phosphodiesterase (EC:3.1.3.5)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031E1FD5
Trifunctional nucleotide phosphoesterase protein YfkN {ECO:0000313|EMBL:CEJ09852.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCN18_10_11_15_R5_B_scaffold_17_8
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6350..7366)
DNA (1017bp) protein (339aa)
Putative Bug-like extra-cytoplasmic solute receptor, TTT family n=1 Tax=Variovorax paradoxus B4 RepID=T1XNE1_VARPD
putative Bug-like extra-cytoplasmic solute receptor, TTT family
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
SCN18_10_11_15_R5_B_scaffold_17_9
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7580..9016
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CEP2_9RHOB
AMP-dependent synthetase and ligase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
SCN18_10_11_15_R5_B_scaffold_17_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9272..9673
DNA (402bp) protein (134aa)
Putative membrane protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YT57_9RHIZ
DoxX family protein {ECO:0000313|EMBL:KFC70722.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_10_11_15_R5_B_scaffold_17_11
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9820..10125
DNA (306bp) protein (102aa)
stress responsive protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI000379C160
Stress responsive A/B Barrel Domain protein {ECO:0000313|EMBL:CEJ09867.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
stress responsive alpha-beta barrel
SCN18_10_11_15_R5_B_scaffold_17_12
SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10144..11010)
DNA (867bp) protein (289aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00036961E1
3-methyl-2-oxobutanoate hydroxymethyltransferase
SCN18_10_11_15_R5_B_scaffold_17_13
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11066..11920)
DNA (855bp) protein (285aa)
membrane protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000314175C
Sulfite exporter TauE/SafE {ECO:0000313|EMBL:CEJ09869.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
membrane protein
SCN18_10_11_15_R5_B_scaffold_17_14
SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12068..12730)
DNA (663bp) protein (221aa)
gstA; glutathione S-transferase (EC:2.5.1.18)
Glutathione S-transferase {ECO:0000313|EMBL:AEK60332.1}; EC=2.5.1.18 {ECO:0000313|EMBL:AEK60332.1};; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
Glutathione S-transferase n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AHQ4_COLFT
SCN18_10_11_15_R5_B_scaffold_17_15
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12767..13768)
DNA (1002bp) protein (334aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
tRNA-dihydrouridine synthase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IN78_XANP2
tRNA-dihydrouridine synthase A
SCN18_10_11_15_R5_B_scaffold_17_16
Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14197..14559)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TDE4_MESCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV14510.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCN18_10_11_15_R5_B_scaffold_17_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14753..15517)
DNA (765bp) protein (255aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Agrobacterium sp. (strain H13-3) RepID=F0LFD1_AGRSH
4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 {ECO:0000313|EMBL:CEJ11085.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
short-chain dehydrogenase/reductase SDR
SCN18_10_11_15_R5_B_scaffold_17_18
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15520..16440)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Burkholderia bryophila RepID=UPI000377D8B8
D-alanine aminotransferase {ECO:0000313|EMBL:CEJ11086.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
class IV aminotransferase
SCN18_10_11_15_R5_B_scaffold_17_19
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16469..17311)
DNA (843bp) protein (281aa)
Shikimate 5-dehydrogenase I alpha (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Citreicella sp. SE45 RepID=D0D2Y1_9RHOB
Shikimate dehydrogenase {ECO:0000313|EMBL:CEJ11087.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCN18_10_11_15_R5_B_scaffold_17_20
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17366..18847)
DNA (1482bp) protein (494aa)
amidase (EC:3.5.1.4)
Amidase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B6J0_PARDP
6-aminohexanoate-cyclic-dimer hydrolase {ECO:0000313|EMBL:CEJ11088.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCN18_10_11_15_R5_B_scaffold_17_21
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18822..19208)
DNA (387bp) protein (129aa)
PREDICTED: rutC family protein C23G10.2-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C18330
Putative reactive intermediate deaminase TdcF {ECO:0000313|EMBL:CEJ11089.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
endoribonuclease L-PSP
SCN18_10_11_15_R5_B_scaffold_17_22
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19254..20309)
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Burkholderia bryophila RepID=UPI000372878E
Acetylpolyamine aminohydrolase {ECO:0000313|EMBL:CEJ11090.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
putative acetylpolyamine aminohydrolase AphA
SCN18_10_11_15_R5_B_scaffold_17_23
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20343..21332)
DNA (990bp) protein (330aa)
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense GSF30.;"
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC:2.3.1.12)
Dihydrolipoamide acetyltransferase n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0FU16_9BURK
SCN18_10_11_15_R5_B_scaffold_17_24
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21337..23622)
DNA (2286bp) protein (762aa)
Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC:1.2.4.4)
Dehydrogenase E1 component n=1 Tax=Achromobacter piechaudii HLE RepID=J4QIS5_9BURK
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta {ECO:0000313|EMBL:CEJ11092.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCN18_10_11_15_R5_B_scaffold_17_25
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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23713..24288
DNA (576bp) protein (192aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3A5S6_9PROT
Putative lyase {ECO:0000313|EMBL:CEJ11093.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCN18_10_11_15_R5_B_scaffold_17_26
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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24334..25059
DNA (726bp) protein (242aa)
Transcriptional regulator, GntR family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IFM3_XANP2
HTH-type transcriptional regulator McbR {ECO:0000313|EMBL:CEJ11094.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
GntR family transcriptional regulator
SCN18_10_11_15_R5_B_scaffold_17_27
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25105..26766)
DNA (1662bp) protein (554aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000300F5C3
Glutathione import ATP-binding protein GsiA {ECO:0000313|EMBL:CEJ11095.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
peptide ABC transporter ATP-binding protein
SCN18_10_11_15_R5_B_scaffold_17_28
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26768..27604)
DNA (837bp) protein (279aa)
ABC transporter permease n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F6B428
Dipeptide transport system permease protein DppC {ECO:0000313|EMBL:CEJ11096.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
binding-protein-dependent transport systems inner membrane component
SCN18_10_11_15_R5_B_scaffold_17_29
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27617..28594)
DNA (978bp) protein (326aa)
ABC transporter permease n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000312B15E
Dipeptide transport system permease protein DppB {ECO:0000313|EMBL:CEJ11097.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
binding-protein-dependent transport systems inner membrane component
SCN18_10_11_15_R5_B_scaffold_17_30
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28659..30230)
DNA (1572bp) protein (524aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030C1B0D
Oligopeptide-binding protein AppA {ECO:0000313|EMBL:CEJ11098.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
extracellular solute-binding protein
Displaying items 1-30 of 361 in total

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