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SCN18_10_11_15_R5_B_scaffold_402

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R5_B_scaffold_402_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1634
DNA (1632bp) protein (544aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002E77091
Heme/hemopexin-binding protein {ECO:0000313|EMBL:CEJ14686.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
large exoprotein
SCN18_10_11_15_R5_B_scaffold_402_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1756..3387)
DNA (1632bp) protein (544aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000362E99B
Putative oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:KFC69276.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
glucose-methanol-choline oxidoreductase
SCN18_10_11_15_R5_B_scaffold_402_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3377..3697)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00037D978A
Uncharacterized protein {ECO:0000313|EMBL:KFC69273.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_10_11_15_R5_B_scaffold_402_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3694..5118)
DNA (1425bp) protein (475aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00035EE8F6
MFS transporter, metabolite:H+ symporter {ECO:0000313|EMBL:KFC69272.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
sugar transporter
SCN18_10_11_15_R5_B_scaffold_402_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5150..6484)
DNA (1335bp) protein (445aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDI3_XANP2
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:KFC69271.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
DegT/DnrJ/EryC1/StrS aminotransferase
SCN18_10_11_15_R5_B_scaffold_402_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6647..7981
DNA (1335bp) protein (445aa)
Sugar transporter {ECO:0000313|EMBL:ABS66077.1}; EC=1.3.1.74 {ECO:0000313|EMBL:ABS66077.1};; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000363F2B2
sugar transporter
SCN18_10_11_15_R5_B_scaffold_402_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8011..9036)
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000367B742
Uncharacterized protein {ECO:0000313|EMBL:KFC69269.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_10_11_15_R5_B_scaffold_402_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9533..10729)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D5R0_BRAJP
Carboxypeptidase G2 {ECO:0000313|EMBL:CEJ10297.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCN18_10_11_15_R5_B_scaffold_402_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10880..11467)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KES6_MESAW
Uncharacterized protein {ECO:0000313|EMBL:CEJ11118.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCN18_10_11_15_R5_B_scaffold_402_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11758..12375)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IEH5_AZOC5
CYTH domain protein {ECO:0000313|EMBL:CEJ11543.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCN18_10_11_15_R5_B_scaffold_402_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12502..13410)
DNA (909bp) protein (303aa)
Lipase/esterase n=1 Tax=uncultured bacterium RepID=B0L3I3_9BACT
3-oxoadipate enol-lactonase 2 {ECO:0000313|EMBL:CEJ14610.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
alpha/beta hydrolase
SCN18_10_11_15_R5_B_scaffold_402_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13547..13774)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D6B7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR78016.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_10_11_15_R5_B_scaffold_402_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13945..15042)
DNA (1098bp) protein (366aa)
beta-lactamase (EC:3.5.1.46)
Putative Beta-lactamase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TPA4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KGT80861.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
SCN18_10_11_15_R5_B_scaffold_402_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15234..15824)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S3K8_9BRAD
Membrane protein {ECO:0000313|EMBL:KJC56325.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
SCN18_10_11_15_R5_B_scaffold_402_15
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15821..16147)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TFK5_9BRAD
PadR family transcriptional regulator {ECO:0000313|EMBL:KJC56324.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
PadR family transcriptional regulator
SCN18_10_11_15_R5_B_scaffold_402_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16216..16428)
DNA (213bp) protein (71aa)
SCN18_10_11_15_R5_B_scaffold_402_17
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16513..18978)
DNA (2466bp) protein (822aa)
Peptidase C14 caspase catalytic subunit p20 n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IBS3_BEII9
peptidase C14 caspase catalytic subunit p20
Peptidase C14 caspase catalytic subunit p20 {ECO:0000313|EMBL:ACB93795.1}; Flags: Precursor;; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCN18_10_11_15_R5_B_scaffold_402_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19307..22348)
DNA (3042bp) protein (1014aa)
Peptidase C14 caspase catalytic subunit p20 n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IBS3_BEII9
peptidase C14 caspase catalytic subunit p20
Peptidase C14 caspase catalytic subunit p20 {ECO:0000313|EMBL:ACB93795.1}; Flags: Precursor;; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCN18_10_11_15_R5_B_scaffold_402_19
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22636..23496)
DNA (861bp) protein (287aa)
Amidohydrolase 2 n=1 Tax=Oceanibaculum indicum P24 RepID=K2K7V5_9PROT
Amidohydrolase {ECO:0000313|EMBL:CEJ10290.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
amidohydrolase 2
SCN18_10_11_15_R5_B_scaffold_402_20
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23493..24941)
DNA (1449bp) protein (483aa)
Asp-tRNA Asn / Glu-tRNA Gln amidotransferase subunit A-like protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2KN72_9PROT
Acylamidase {ECO:0000313|EMBL:CEJ10291.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
amidase
SCN18_10_11_15_R5_B_scaffold_402_21
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24938..26644)
DNA (1707bp) protein (569aa)
AMP-dependent synthetase and ligase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J7A9_9PROT
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CEJ10292.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
AMP-dependent synthetase and ligase
SCN18_10_11_15_R5_B_scaffold_402_22
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26908..27987
DNA (1080bp) protein (360aa)
LysR family transcriptional regulator n=1 Tax=Oceanibaculum indicum P24 RepID=K2K7W0_9PROT
HTH-type transcriptional activator CmpR {ECO:0000313|EMBL:CEJ10293.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
bacterial regulatory helix-turn-helix, lysR family protein
SCN18_10_11_15_R5_B_scaffold_402_23
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27868..28665)
DNA (798bp) protein (266aa)
Binding-protein-dependent transporter inner membrane component family protein 57 n=1 Tax=Oceanibaculum indicum P24 RepID=K2JWJ1_9PROT
Putative 2-aminoethylphosphonate transport system permease protein PhnV {ECO:0000313|EMBL:CEJ10294.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
binding-protein-dependent transporter inner membrane component family protein 57
SCN18_10_11_15_R5_B_scaffold_402_24
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28671..29507)
DNA (837bp) protein (279aa)
Binding-protein-dependent transporter inner membrane component family protein 58 n=1 Tax=Oceanibaculum indicum P24 RepID=K2JU21_9PROT
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000313|EMBL:CEJ10295.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
ABC transporter permease
SCN18_10_11_15_R5_B_scaffold_402_25
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29504..30682)
DNA (1179bp) protein (393aa)
Putative ABC transporter, ATP-binding protein n=1 Tax=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) RepID=Q7WJ01_BORBR
Uncharacterized protein {ECO:0000313|EMBL:KEJ97532.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter pseudonitzschiae.;"
ABC transporter ATP-binding protein
SCN18_10_11_15_R5_B_scaffold_402_26
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30753..31784)
DNA (1032bp) protein (344aa)
Extracellular solute-binding family protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JWJ7_9PROT
Spermidine/putrescine ABC transporter periplasmic substrate-binding protein {ECO:0000313|EMBL:CEJ10296.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
extracellular solute-binding family protein
SCN18_10_11_15_R5_B_scaffold_402_27
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32141..33154
DNA (1014bp) protein (338aa)
Twin-arginine translocation pathway signal sequence domain protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CWU2_9RHIZ
Twin-arginine translocation pathway signal sequence domain protein {ECO:0000313|EMBL:CDO58939.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
Twin-arginine translocation pathway signal
Displaying 27 items

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