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SCN18_10_11_15_R5_B_scaffold_711

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R5_B_scaffold_711_1
bacterium YEK0313, Bacteria

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comp(70..294)
DNA (225bp) protein (75aa)
Uncharacterized protein {ECO:0000313|EMBL:CEJ12697.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCN18_10_11_15_R5_B_scaffold_711_2
unknown

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comp(576..839)
DNA (264bp) protein (88aa)

This feature has no annotations

SCN18_10_11_15_R5_B_scaffold_711_3
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1173..2840)
DNA (1668bp) protein (556aa)
General substrate transporter n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A931_STAND
Proline/betaine transporter {ECO:0000313|EMBL:CEJ12701.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
general substrate transporter
SCN18_10_11_15_R5_B_scaffold_711_4
bacterium YEK0313, Bacteria

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3224..3676
DNA (453bp) protein (151aa)
Uncharacterized protein {ECO:0000313|EMBL:CEJ12702.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCN18_10_11_15_R5_B_scaffold_711_5
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4056..5678)
DNA (1623bp) protein (541aa)
General substrate transporter n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A931_STAND
Proline/betaine transporter {ECO:0000313|EMBL:CEJ12701.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
general substrate transporter
SCN18_10_11_15_R5_B_scaffold_711_6
bacterium YEK0313, Bacteria

Not on your lists

6090..6491
DNA (402bp) protein (134aa)
Uncharacterized protein {ECO:0000313|EMBL:CEJ12702.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCN18_10_11_15_R5_B_scaffold_711_7
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6455..7288)
DNA (834bp) protein (278aa)
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HL47_9BRAD
23S rRNA (Guanosine-2'-O-)-methyltransferase RlmB {ECO:0000313|EMBL:CEJ12703.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
RNA methyltransferase
SCN18_10_11_15_R5_B_scaffold_711_8
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7598..9235)
DNA (1638bp) protein (546aa)
Putative GMC oxidoreductase n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0Q489_9RHIZ
Putative GMC oxidoreductase {ECO:0000313|EMBL:CCM79322.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
glucose-methanol-choline oxidoreductase protein
SCN18_10_11_15_R5_B_scaffold_711_9
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

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comp(9232..10188)
DNA (957bp) protein (319aa)
oxidoreductase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B59857
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein {ECO:0000313|EMBL:ETA71373.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
oxidoreductase
SCN18_10_11_15_R5_B_scaffold_711_10
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10389..11408
DNA (1020bp) protein (340aa)
Alginate lyase precursor (EC:4.2.2.3)
Alginate lyase {ECO:0000313|EMBL:AIY39292.1}; EC=4.2.2.3 {ECO:0000313|EMBL:AIY39292.1};; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
Alginate lyase n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KLD2_STEMA
SCN18_10_11_15_R5_B_scaffold_711_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11537..12967
DNA (1431bp) protein (477aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UI61_METS4
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:ACA16912.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCN18_10_11_15_R5_B_scaffold_711_12
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12972..13757
DNA (786bp) protein (262aa)
yxkH; polysaccharide deacetylase (EC:3.-.-.-)
Glycosyl transferase family protein n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1G973_9PSEU
Glycosyl transferase family protein {ECO:0000313|EMBL:EOD67937.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
SCN18_10_11_15_R5_B_scaffold_711_13
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13702..14601)
DNA (900bp) protein (300aa)
Succinoglycan biosynthesis protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NRM8_9RHOB
Succinoglycan biosynthesis protein {ECO:0000313|EMBL:EAV44809.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
succinoglycan biosynthesis protein ExoM
SCN18_10_11_15_R5_B_scaffold_711_14
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14589..15887)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=2 Tax=Labrenzia RepID=U7FRK5_9RHOB
ExoQ-like protein {ECO:0000313|EMBL:EAV44812.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
putative exopolysaccharide production protein, ExoQ-like protein
SCN18_10_11_15_R5_B_scaffold_711_15
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(15884..17113)
DNA (1230bp) protein (410aa)
Putative uncharacterized protein n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I191_RHOVT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP70104.1}; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;"
SCN18_10_11_15_R5_B_scaffold_711_16
unknown

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17288..17353
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 16 items

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