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SCN18_13_7_16_R1_B_scaffold_1657

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_1657_1
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(358..825)
DNA (468bp) protein (156aa)
Protein tyrosine phosphatase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SW24_NITWN
low molecular weight phosphotyrosine protein phosphatase
Protein tyrosine phosphatase {ECO:0000313|EMBL:ABA03517.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCN18_13_7_16_R1_B_scaffold_1657_2
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(870..1370)
DNA (501bp) protein (167aa)
UPF0262 protein RPB_4349 n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Y4349_RHOP2
hypothetical protein
UPF0262 protein RPB_4349 {ECO:0000255|HAMAP-Rule:MF_00678}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCN18_13_7_16_R1_B_scaffold_1657_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1367..2665)
DNA (1299bp) protein (433aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hisD; histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NSS7_9BRAD
SCN18_13_7_16_R1_B_scaffold_1657_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2768..3169)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002EE86F0
Uncharacterized protein {ECO:0000313|EMBL:KJC33683.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_1657_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3177..4466)
DNA (1290bp) protein (430aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000255|HAMAP-Rule:MF_00111}; EC=2.5.1.7 {ECO:0000255|HAMAP-Rule:MF_00111};; Enoylpyruvate transferase {ECO:0000255|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000255|HAMAP-Rule:MF_00111}; Short=EPT {ECO:0000255|HAMAP-Rule:MF_00111};; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=MURA_RHOPB
SCN18_13_7_16_R1_B_scaffold_1657_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4604..5278)
DNA (675bp) protein (225aa)
epimerase n=1 Tax=Afipia birgiae RepID=UPI000382D82C
Epimerase {ECO:0000313|EMBL:KJC33682.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_1657_7
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5602..6045
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20Y41_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD89945.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCN18_13_7_16_R1_B_scaffold_1657_trna_1
unknown

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6165..6244
DNA (80bp)
transferRNA Thr
SCN18_13_7_16_R1_B_scaffold_1657_8
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6355..7167
DNA (813bp) protein (271aa)
Protein FdhD homolog n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07HL8_RHOP5
formate dehydrogenase accessory protein
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCN18_13_7_16_R1_B_scaffold_1657_9
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7505..8161
DNA (657bp) protein (219aa)
Possible outer membrane protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WT00_9BRAD
Possible outer membrane protein {ECO:0000313|EMBL:EAQ36854.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
outer membrane protein
SCN18_13_7_16_R1_B_scaffold_1657_10
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8361..10514
DNA (2154bp) protein (718aa)
Phosphohistidine phosphatase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IJH4_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig180, whole genome shotgun sequence {ECO:0000313|EMBL:KIU47168.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
methyl-accepting chemotaxis protein
SCN18_13_7_16_R1_B_scaffold_1657_11
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10660..11694
DNA (1035bp) protein (345aa)
biotin synthase (EC:2.8.1.6)
Biotin synthase {ECO:0000255|HAMAP-Rule:MF_01694}; EC=2.8.1.6 {ECO:0000255|HAMAP-Rule:MF_01694};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Biotin synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=BIOB_NITHX
SCN18_13_7_16_R1_B_scaffold_1657_12
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11845..12960
DNA (1116bp) protein (372aa)
beta-lactamase n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003655372
beta-lactamase
Uncharacterized protein {ECO:0000313|EMBL:BAL13898.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
Displaying 13 items

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