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SCN18_13_7_16_R1_B_scaffold_1880

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_1880_1
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..650)
DNA (648bp) protein (216aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J1Q6_RHOP2
Crp/FNR family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ABD05604.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCN18_13_7_16_R1_B_scaffold_1880_2
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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871..2751
DNA (1881bp) protein (627aa)
Uncharacterized protein involved in outer membrane biogenesis n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YEN7_9BRAD
Uncharacterized protein involved in outer membrane biogenesis {ECO:0000313|EMBL:EHQ99963.1}; Flags: Precursor;; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_1880_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2903..4846
DNA (1944bp) protein (648aa)
Family 3 adenylate cyclase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QL68_9BRAD
Family 3 adenylate cyclase {ECO:0000313|EMBL:EIG60524.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
adenylate/guanylate cyclase
SCN18_13_7_16_R1_B_scaffold_1880_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5048..5956
DNA (909bp) protein (303aa)
Secretion protein HlyD n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHG4_NITHX
RND transporter {ECO:0000313|EMBL:KIZ40464.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
secretion protein HlyD
SCN18_13_7_16_R1_B_scaffold_1880_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6190..7059)
DNA (870bp) protein (290aa)
Peptidase C14, caspase catalytic subunit p20 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHG3_NITHX
peptidase C14, caspase catalytic subunit p20
Peptidase C14, caspase catalytic subunit p20 {ECO:0000313|EMBL:ABE64334.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_13_7_16_R1_B_scaffold_1880_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7236..7478)
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YJ17_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ETR78496.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_1880_7
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7715..9457
DNA (1743bp) protein (581aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DF23_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL05627.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCN18_13_7_16_R1_B_scaffold_1880_8
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9552..10283
DNA (732bp) protein (244aa)
Nuclease (SNase domain protein) n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07T80_RHOP5
Nuclease {ECO:0000313|EMBL:KIZ47704.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
nuclease
SCN18_13_7_16_R1_B_scaffold_1880_9
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10318..11172
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003200369
Putrescine transport system permease {ECO:0000313|EMBL:ERF79792.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_1880_10
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11310..11417
DNA (108bp) protein (36aa)
Aminotransferase, class V n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20XC5_RHOPB
Aminotransferase {ECO:0000313|EMBL:KIZ47702.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
class V aminotransferase
Displaying 10 items

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