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SCN18_13_7_16_R1_B_scaffold_3408

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_3408_1
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..935)
DNA (933bp) protein (311aa)
3-oxoacyl-(Acyl carrier protein) synthase {ECO:0000313|EMBL:EAQ37160.1}; EC=2.3.1.41 {ECO:0000313|EMBL:EAQ37160.1};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-(Acyl carrier protein) synthase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WS44_9BRAD
SCN18_13_7_16_R1_B_scaffold_3408_2
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1098..1628)
DNA (531bp) protein (177aa)
3-hydroxydecanoyl-(acyl carrier protein) dehydratase (EC:4.2.1.60)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase {ECO:0000255|HAMAP-Rule:MF_00405}; EC=4.2.1.59 {ECO:0000255|HAMAP-Rule:MF_00405};; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA {ECO:0000255|HAMAP-Rule:MF_00405}; Beta-hydroxydecanoyl thioester dehydrase {ECO:0000255|HAMAP-Rule:MF_00405}; Trans-2-decenoyl-[acyl-carrier-protein] isomerase {ECO:0000255|HAMAP-Rule:MF_00405}; EC=5.3.3.14 {ECO:0000255|HAMAP-Rule:MF_00405};; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=FABA_RHOPB
SCN18_13_7_16_R1_B_scaffold_3408_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1925..2413
DNA (489bp) protein (163aa)
Fur family transcriptional regulator, iron response regulator n=2 Tax=Bradyrhizobium RepID=U1H444_9BRAD
Fur family transcriptional regulator, iron response regulator {ECO:0000313|EMBL:ERF84552.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
ferric uptake regulator family protein
SCN18_13_7_16_R1_B_scaffold_3408_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2517..3044)
DNA (528bp) protein (176aa)
aspartyl-trna synthetase n=1 Tax=Afipia birgiae RepID=UPI0003019D30
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGP08956.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
SCN18_13_7_16_R1_B_scaffold_3408_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3386..4387
DNA (1002bp) protein (334aa)
glyoxylate reductase (EC:1.1.1.26)
Glyoxylate reductase {ECO:0000313|EMBL:ABJ04203.1}; EC=1.1.1.26 {ECO:0000313|EMBL:ABJ04203.1};; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
Glyoxylate reductase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07V31_RHOP5
SCN18_13_7_16_R1_B_scaffold_3408_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4538..6118
DNA (1581bp) protein (527aa)
Putative long-chain-fatty-acid--CoA ligase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G054_9BRAD
putative long-chain-fatty-acid--CoA ligase
Putative long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:BAL74141.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCN18_13_7_16_R1_B_scaffold_3408_7
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6177..6578)
DNA (402bp) protein (134aa)
PF14248 domain protein n=1 Tax=Leptospira alexanderi serovar Manhao 3 str. L 60 RepID=V6HY32_9LEPT
PF14248 domain protein {ECO:0000313|EMBL:EQA61957.1}; TaxID=1049759 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira alexanderi serovar Manhao 3 str. L 60.;"
putative secreted protein
Displaying 7 items

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