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SCN18_13_7_16_R1_B_scaffold_6393

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_6393_1
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1069
DNA (1068bp) protein (356aa)
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase {ECO:0000255|HAMAP-Rule:MF_00012}; Short=DAD {ECO:0000255|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000255|HAMAP-Rule:MF_00012};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Dihydroxy-acid dehydratase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=ILVD_NITHX
SCN18_13_7_16_R1_B_scaffold_6393_2
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1191..1652)
DNA (462bp) protein (154aa)
Putative PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1T7_9BRAD
Nitrogen regulatory protein {ECO:0000313|EMBL:CEG09957.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_6393_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2350..2970)
DNA (621bp) protein (207aa)
Putative sigma(54) modulation protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JCM6_OLICO
sigma 54 modulation protein/ribosomal protein S30EA
Putative sigma(54) modulation protein {ECO:0000313|EMBL:AEI04806.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_13_7_16_R1_B_scaffold_6393_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3214..3960)
DNA (747bp) protein (249aa)
RNA polymerase factor sigma-54 (EC:2.7.7.6)
RNA polymerase sigma54 factor n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000345DD15
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCN18_13_7_16_R1_B_scaffold_6393_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3957..4769)
DNA (813bp) protein (271aa)
rpoN2; RNA polymerase factor sigma-54 (EC:2.7.7.6)
RNA polymerase sigma-54 factor n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NXE1_9BRAD
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
SCN18_13_7_16_R1_B_scaffold_6393_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5087..5257)
DNA (171bp) protein (57aa)
ABC transporter ATPase (EC:3.6.3.25)
ABC transporter, ATPase subunit {ECO:0000313|EMBL:ABA03442.1}; EC=3.6.3.25 {ECO:0000313|EMBL:ABA03442.1};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
ABC transporter, ATPase subunit n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SW99_NITWN
Displaying 6 items

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