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SCN18_13_7_16_R1_B_scaffold_4109

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_4109_1
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..904)
DNA (903bp) protein (301aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037874E8
dctM; TRAP C4-dicarboxylate transport system permease DctM
TRAP-type C4-dicarboxylate transport system, large permease component (DctM subunit) {ECO:0000313|EMBL:CCD88375.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
SCN18_13_7_16_R1_B_scaffold_4109_2
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(901..1476)
DNA (576bp) protein (192aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Bradyrhizobium elkanii RepID=UPI00035FF854
dctQ1; TRAP dicarboxylate family transporter subunit DctQ
Possible TrapT family, dctQ subunit, C4-dicarboxylate transport {ECO:0000313|EMBL:CAE27489.1}; Flags: Precursor;; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
SCN18_13_7_16_R1_B_scaffold_4109_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1748..2752)
DNA (1005bp) protein (335aa)
C4-dicarboxylate ABC transporter n=1 Tax=Bradyrhizobium elkanii RepID=UPI000374586A
Bradyrhizobium elkanii strain UASWS1015 Contig186, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44274.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
TRAP dicarboxylate transporter subunit DctP
SCN18_13_7_16_R1_B_scaffold_4109_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2972..4531)
DNA (1560bp) protein (520aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
leuA; 2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IEC1_9BRAD
SCN18_13_7_16_R1_B_scaffold_4109_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5038..5763
DNA (726bp) protein (242aa)
guanylate cyclase n=1 Tax=Rhizobium mongolense RepID=UPI0003B727BC
adenylate/guanylate cyclase
Adenylate/guanylate cyclase {ECO:0000313|EMBL:AEG06622.1}; TaxID=698936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain BL225C).;"
Displaying 5 items

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