ggKbase home page

SCN18_13_7_16_R1_B_scaffold_4154

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_4154_1
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..442)
DNA (441bp) protein (147aa)
ABC transporter related n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3Q651_RHOPT
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACF00128.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
SCN18_13_7_16_R1_B_scaffold_4154_2
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(439..1683)
DNA (1245bp) protein (415aa)
Possible branched-chain amino acid transport system substrate-binding protein n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N9X1_RHOPA
branched chain amino-acid ABC transporter substrate-binding protein
Possible branched-chain amino acid transport system substrate-binding protein {ECO:0000313|EMBL:CAE26858.1}; Flags: Precursor;; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
SCN18_13_7_16_R1_B_scaffold_4154_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1968..2834)
DNA (867bp) protein (289aa)
Putative transcriptional regulatory protein (HTH-type), LuxR family n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T7N2_9BRAD
Putative transcriptional regulatory protein (HTH-type), LuxR family {ECO:0000313|EMBL:CCE02459.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
LuxR family transcriptional regulator
SCN18_13_7_16_R1_B_scaffold_4154_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3052..4272
DNA (1221bp) protein (407aa)
cytochrome P450 (EC:1.14.-.-)
Putative cytochrome P450 {ECO:0000313|EMBL:ABQ32994.1}; EC=1.14.-.- {ECO:0000313|EMBL:ABQ32994.1};; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002FCDA2D
SCN18_13_7_16_R1_B_scaffold_4154_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4424..5461
DNA (1038bp) protein (346aa)
Inner-membrane translocator n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13D25_RHOPS
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ABE38014.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCN18_13_7_16_R1_B_scaffold_4154_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5458..5793
DNA (336bp) protein (112aa)
ABC transporter related n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13D24_RHOPS
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABE38015.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
Displaying 6 items

View Taxonomy