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SCN18_13_7_16_R1_B_scaffold_4577

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_4577_1
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(120..728)
DNA (609bp) protein (203aa)
CinA-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMA0_NITHX
CinA-like protein
CinA-like protein {ECO:0000313|EMBL:ABE62647.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_13_7_16_R1_B_scaffold_4577_2
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(730..1941)
DNA (1212bp) protein (404aa)
Bifunctional enzyme IspD/IspF {ECO:0000255|HAMAP-Rule:MF_01520}; Includes:; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000255|HAMAP-Rule:MF_01520}; EC=2.7.7.60 {ECO:0000255|HAMAP-Rule:MF_01520};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000255|HAMAP-Rule:MF_01520}; MEP cytidylyltransferase {ECO:0000255|HAMAP-Rule:MF_01520}; Short=MCT {ECO:0000255|HAMAP-Rule:MF_01520};; Includes:; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000255|HAMAP-Rule:MF_01520}; Short=MECDP-synthase {ECO:0000255|HAMAP-Rule:MF_01520};; Short=MECPP-synthase {ECO:0000255|HAMAP-Rule:MF_01520};; Short=MECPS {ECO:0000255|HAMAP-Rule:MF_01520};; EC=4.6.1.12 {ECO:0000255|HAMAP-Rule:MF_01520};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Bifunctional enzyme IspD/IspF n=2 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=ISPDF_NITHX
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
SCN18_13_7_16_R1_B_scaffold_4577_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2221..3234
DNA (1014bp) protein (338aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
tRNA-dihydrouridine synthase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003828A04
putative tRNA-dihydrouridine synthase, Nitrogen regulation protein NifR3
SCN18_13_7_16_R1_B_scaffold_4577_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3231..4403
DNA (1173bp) protein (391aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
Nitrogen regulation protein ntrB n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IPH9_9BRAD
signal transduction histidine kinase, nitrogen specific, NtrB
SCN18_13_7_16_R1_B_scaffold_4577_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5453..5812
DNA (360bp) protein (120aa)
Nitrogen assimilation regulatory protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PE86_9BRAD
Nitrogen assimilation regulatory protein {ECO:0000313|EMBL:EKS39861.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
nitrogen metabolism transcriptional regulator NtrC
SCN18_13_7_16_R1_B_scaffold_4577_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5993..6610
DNA (618bp) protein (206aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
Multi-sensor signal transduction histidine kinase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q214Q7_RHOPB
multi-sensor signal transduction histidine kinase
Displaying 6 items

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