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SCN18_13_7_16_R1_B_scaffold_459

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Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_459_1
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38..1231)
DNA (1194bp) protein (398aa)
ABC-type Na+ efflux pump, permease component n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IF99_FLUTR
ABC-type Na+ efflux pump, permease
ABC-type Na+ efflux pump, permease component {ECO:0000313|EMBL:AEA44584.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCN18_13_7_16_R1_B_scaffold_459_2
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1228..1995)
DNA (768bp) protein (256aa)
Monosaccharide-transporting ATPase (EC:3.6.3.17)
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:AEA44585.1}; EC=3.6.3.17 {ECO:0000313|EMBL:AEA44585.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Monosaccharide-transporting ATPase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFA0_FLUTR
SCN18_13_7_16_R1_B_scaffold_459_3
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2005..3225)
DNA (1221bp) protein (407aa)
alanine dehydrogenase (EC:1.4.1.1)
Alanine dehydrogenase {ECO:0000313|EMBL:AEA44578.1}; EC=1.4.1.1 {ECO:0000313|EMBL:AEA44578.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Alanine dehydrogenase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IEN9_FLUTR
SCN18_13_7_16_R1_B_scaffold_459_4
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3294..5402)
DNA (2109bp) protein (703aa)
Tex-like protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IC94_FLUTR
Tex-like protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_459_5
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5405..6193)
DNA (789bp) protein (263aa)
Putative uncharacterized protein n=1 Tax=uncultured Flavobacteriia bacterium RepID=H6RGX7_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:CCG00288.1}; TaxID=212695 species="Bacteria; Bacteroidetes; Flavobacteriia; environmental samples.;" source="uncultured Flavobacteriia bacterium.;"
SCN18_13_7_16_R1_B_scaffold_459_6
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6190..6663)
DNA (474bp) protein (158aa)
CMP/dCMP deaminase zinc-binding protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IK97_FLUTR
CMP/dCMP deaminase zinc-binding protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_459_7
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6660..7322)
DNA (663bp) protein (221aa)
SCN18_13_7_16_R1_B_scaffold_459_8
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7513..7704
DNA (192bp) protein (64aa)
Cold-shock DNA-binding protein family id=4290999 bin=GWC2_Bacteroidetes_33_15 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_33_15 organism_group=Bacteroidetes organism_desc=Good +
cold-shock DNA-binding protein family
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_459_9
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7812..8579
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIJ0_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCN18_13_7_16_R1_B_scaffold_459_10
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8579..9046
DNA (468bp) protein (156aa)
UPI0003D5CD2E related cluster n=1 Tax=unknown RepID=UPI0003D5CD2E
Uncharacterized protein {ECO:0000313|EMBL:CEG26159.1}; TaxID=1476857 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. B-jedd.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_459_11
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9060..10148)
DNA (1089bp) protein (363aa)
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2III1_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_459_12
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10223..11389
DNA (1167bp) protein (389aa)
Proline dehydrogenase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2III0_FLUTR
proline dehydrogenase
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_459_13
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


11491..11847
DNA (357bp) protein (119aa)
50S ribosomal protein L19 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKE7_FLUTR
50S ribosomal protein L19
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_459_14
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11956..12723
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IA99_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_459_15
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12857..13633
DNA (777bp) protein (259aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9S8_FLUTR
LytTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:AEA43074.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCN18_13_7_16_R1_B_scaffold_459_16
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13630..16575
DNA (2946bp) protein (982aa)
Signal transduction histidine kinase, LytS n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9S9_FLUTR
signal transduction histidine kinase LytS
Signal transduction histidine kinase, LytS {ECO:0000313|EMBL:AEA43075.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCN18_13_7_16_R1_B_scaffold_459_17
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16624..16869
DNA (246bp) protein (82aa)
SCN18_13_7_16_R1_B_scaffold_459_18
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16925..18940)
DNA (2016bp) protein (672aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=480520 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides profundi.;"
Urocanate hydratase n=1 Tax=Myroides odoratimimus CCUG 3837 RepID=K1HAG4_9FLAO
urocanate hydratase
SCN18_13_7_16_R1_B_scaffold_459_19
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18983..20470)
DNA (1488bp) protein (496aa)
Putative uncharacterized protein id=1825812 bin=GWE2_Bacteroidetes_42_42 species=unknown genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=BJP_08E140C01_Bacteriodales_41_10
SCN18_13_7_16_R1_B_scaffold_459_20
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20515..21795)
DNA (1281bp) protein (427aa)
enolase (EC:4.2.1.11)
Enolase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II54_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_459_21
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21792..22895)
DNA (1104bp) protein (368aa)
carbamoyl-phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Carbamoyl-phosphate synthase small chain n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II55_FLUTR
SCN18_13_7_16_R1_B_scaffold_459_22
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(22981..23520)
DNA (540bp) protein (180aa)
50S ribosomal protein L17 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II56_FLUTR
50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCN18_13_7_16_R1_B_scaffold_459_23
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23542..24534)
DNA (993bp) protein (331aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II57_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_459_24
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(24551..25159)
DNA (609bp) protein (203aa)
30S ribosomal protein S4 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II58_FLUTR
30S ribosomal protein S4
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_459_25
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(25214..25600)
DNA (387bp) protein (129aa)
30S ribosomal protein S11 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II59_FLUTR
30S ribosomal protein S11
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCN18_13_7_16_R1_B_scaffold_459_26
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(25617..25991)
DNA (375bp) protein (125aa)
30S ribosomal protein S13 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II60_FLUTR
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCN18_13_7_16_R1_B_scaffold_459_27
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26005..26121)
DNA (117bp) protein (39aa)
50S ribosomal protein L36 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II61_FLUTR
50S ribosomal protein L36
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_459_28
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26130..26348)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II62_FLUTR
translation initiation factor 1 (bIF-1)
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_459_29
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(26352..27707)
DNA (1356bp) protein (452aa)
Protein translocase subunit SecY n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II63_FLUTR
protein translocase subunit secY/sec61 alpha
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCN18_13_7_16_R1_B_scaffold_459_30
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(27733..28179)
DNA (447bp) protein (149aa)
50S ribosomal protein L15 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II64_FLUTR
50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Displaying items 1-30 of 64 in total

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