ggKbase home page

SCN18_13_7_16_R1_B_scaffold_2096

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_2096_1
SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_21, SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3..173)
DNA (171bp) protein (57aa)
Oxidoreductase domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y0F9_PEDHD
Contig55, whole genome shotgun sequence {ECO:0000313|EMBL:KIO76768.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
oxidoreductase domain-containing protein
SCN18_13_7_16_R1_B_scaffold_2096_2
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(205..1464)
DNA (1260bp) protein (420aa)
sialidase n=1 Tax=Schlesneria paludicola RepID=UPI00029A9D02
lysophospholipase L1-like esterase
Tax=RBG_16_Planctomycetes_64_12_curated
SCN18_13_7_16_R1_B_scaffold_2096_3
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1477..2301)
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003829ABE
Uncharacterized protein {ECO:0000313|EMBL:EON77855.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_2096_4
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2377..5562)
DNA (3186bp) protein (1062aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000363D7FB
Membrane-bound dehydrogenase domain protein {ECO:0000313|EMBL:EEF59040.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
heme-binding protein
SCN18_13_7_16_R1_B_scaffold_2096_5
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5667..7298)
DNA (1632bp) protein (544aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E8A19D
Uncharacterized protein {ECO:0000313|EMBL:EPR66577.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_2096_6
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7495..9057)
DNA (1563bp) protein (521aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036FD28C
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AHM63168.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
RagB/SusD domain-containing protein
SCN18_13_7_16_R1_B_scaffold_2096_7
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9263..10093
DNA (831bp) protein (277aa)
SCN18_13_7_16_R1_B_scaffold_2096_8
unknown

Not on your lists

10265..10336
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 8 items

View Taxonomy