ggKbase home page

SCN18_13_7_16_R1_B_scaffold_2596

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_2596_1
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1..2013)
DNA (2013bp) protein (671aa)
Capsular exopolysaccharide family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK47_NIAKG
capsular exopolysaccharide family protein
Capsular exopolysaccharide family {ECO:0000313|EMBL:AEV96481.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_13_7_16_R1_B_scaffold_2596_2
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2043..2849)
DNA (807bp) protein (269aa)
Soluble ligand binding domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK46_NIAKG
Soluble ligand binding domain-containing protein
Soluble ligand binding domain protein {ECO:0000313|EMBL:AEV96480.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_13_7_16_R1_B_scaffold_2596_3
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3168..5411)
DNA (2244bp) protein (748aa)
(P)ppGpp synthetase I, SpoT/RelA n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJT8_NIAKG
(P)ppGpp synthase {ECO:0000313|EMBL:GAO45016.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
(p)ppGpp synthetase I SpoT/RelA
SCN18_13_7_16_R1_B_scaffold_2596_trna_1
unknown

Not on your lists

5499..5580
DNA (82bp)
transferRNA Leu
SCN18_13_7_16_R1_B_scaffold_2596_4
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5632..6660)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YSN2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN17177.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
glycosyltransferase
SCN18_13_7_16_R1_B_scaffold_2596_5
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6600..7748)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:661 RepID=R5SN97_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ48176.1}; TaxID=1262746 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:661.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_2596_6
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7752..8573)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI00031959F2
coenzyme F420-reducing hydrogenase subunit beta
Coenzyme F420-reducing hydrogenase, beta subunit {ECO:0000313|EMBL:AFY53083.1}; TaxID=373994 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;"
Displaying 7 items

View Taxonomy