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SCN18_13_7_16_R1_B_scaffold_387

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_387_1
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1..180
DNA (180bp) protein (60aa)
Oxidoreductase domain protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EMK6_RUNSL
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:AEI50977.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCN18_13_7_16_R1_B_scaffold_387_2
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

314..1966
DNA (1653bp) protein (551aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Glucose-6-phosphate isomerase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PV14_CHIPD
glucose-6-phosphate isomerase
SCN18_13_7_16_R1_B_scaffold_387_3
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2095..2526)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003626095
DNA-binding protein {ECO:0000313|EMBL:KIC90017.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
PUR-alpha/beta/gamma DNA/RNA-binding protein
SCN18_13_7_16_R1_B_scaffold_387_4
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2642..4561)
DNA (1920bp) protein (640aa)
Xenobiotic-transporting ATPase {ECO:0000313|EMBL:AEV99986.1}; EC=3.6.3.44 {ECO:0000313|EMBL:AEV99986.1};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Xenobiotic-transporting ATPase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPZ2_NIAKG
xenobiotic-transporting ATPase
SCN18_13_7_16_R1_B_scaffold_387_5
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4915..5511
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B739E3
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EHQ27494.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
RNA polymerase sigma-70 factor
SCN18_13_7_16_R1_B_scaffold_387_6
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5562..6728
DNA (1167bp) protein (389aa)
anti-sigma factor n=1 Tax=Cytophagales str. B6 RepID=UPI0003B5EBE0
Contig180, whole genome shotgun sequence {ECO:0000313|EMBL:KIO74504.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
anti-FecI sigma factor FecR
SCN18_13_7_16_R1_B_scaffold_387_7
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6876..10235
DNA (3360bp) protein (1120aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G2K1_9SPHI
Membrane protein {ECO:0000313|EMBL:KIA92446.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
TonB-dependent receptor
SCN18_13_7_16_R1_B_scaffold_387_8
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10253..11704
DNA (1452bp) protein (484aa)
SusD family protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G2K0_9SPHI
Carbohydrate-binding protein SusD {ECO:0000313|EMBL:KIA92366.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
carbohydrate-binding protein SusD
SCN18_13_7_16_R1_B_scaffold_387_9
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11787..13244
DNA (1458bp) protein (486aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2B510_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS17570.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_387_10
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13414..15777
DNA (2364bp) protein (788aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035D83AA
Uncharacterized protein {ECO:0000313|EMBL:AEI50413.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_387_11
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16268..17584
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KPC9_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD05827.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCN18_13_7_16_R1_B_scaffold_387_12
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17628..18458)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KPD1_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD05829.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCN18_13_7_16_R1_B_scaffold_387_13
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18455..20563)
DNA (2109bp) protein (703aa)
Outer membrane receptor protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KPD2_SOLCM
outer membrane receptor protein
Outer membrane receptor protein {ECO:0000313|EMBL:AFD05830.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCN18_13_7_16_R1_B_scaffold_387_14
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20887..22725)
DNA (1839bp) protein (613aa)
Sulfatase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YA04_9SPHI
Sulfatase {ECO:0000313|EMBL:EHQ24988.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
sulfatase
SCN18_13_7_16_R1_B_scaffold_387_15
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22751..25090)
DNA (2340bp) protein (780aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036F8CF3
Uncharacterized protein {ECO:0000313|EMBL:GAL85059.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
sulfatase
SCN18_13_7_16_R1_B_scaffold_387_16
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25180..26538)
DNA (1359bp) protein (453aa)
arsA; arylsulphatase A (EC:3.1.6.8)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000376EA83
Uncharacterized protein {ECO:0000313|EMBL:GAL85065.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
SCN18_13_7_16_R1_B_scaffold_387_17
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26510..26791)
DNA (282bp) protein (94aa)
SCN18_13_7_16_R1_B_scaffold_387_18
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26785..28245)
DNA (1461bp) protein (487aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036774F3
Uncharacterized protein {ECO:0000313|EMBL:GAL85067.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
RagB/SusD domain-containing protein
SCN18_13_7_16_R1_B_scaffold_387_19
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28272..31322)
DNA (3051bp) protein (1017aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003695DE2
Uncharacterized protein {ECO:0000313|EMBL:GAL85068.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
TonB-dependent receptor plug
SCN18_13_7_16_R1_B_scaffold_387_20
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31832..32149)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFE3_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97353.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_13_7_16_R1_B_scaffold_387_trna_1
unknown

Not on your lists

32427..32497
DNA (71bp)
transferRNA Cys
SCN18_13_7_16_R1_B_scaffold_387_21
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32559..33737
DNA (1179bp) protein (393aa)
Sulphatase-modifying factor protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y0T9_9SPHI
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_13_7_16_R1_B_scaffold_387_22
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34644..34925)
DNA (282bp) protein (94aa)
SCN18_13_7_16_R1_B_scaffold_387_23
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34996..35679)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00037ABD51
Uncharacterized protein {ECO:0000313|EMBL:KFF18578.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_387_24
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35688..36722)
DNA (1035bp) protein (345aa)
Alpha/beta hydrolase fold protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAT9_FLUTR
Uncharacterized protein {ECO:0000313|EMBL:KFF18577.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
alpha/beta hydrolase
SCN18_13_7_16_R1_B_scaffold_387_25
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36760..37137)
DNA (378bp) protein (126aa)
Uncharacterized protein {ECO:0000313|EMBL:ETZ21899.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
SCN18_13_7_16_R1_B_scaffold_387_26
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37235..37654)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CHN6_ELIME
Uncharacterized protein {ECO:0000313|EMBL:KGD66898.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_387_27
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37644..38075)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI000371572B
Uncharacterized protein {ECO:0000313|EMBL:KFF16865.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
uncharacterized protein
SCN18_13_7_16_R1_B_scaffold_387_28
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38509..39627)
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI0003761A6C
Uncharacterized protein {ECO:0000313|EMBL:KFF18576.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
AraC family transcriptional regulator
SCN18_13_7_16_R1_B_scaffold_387_29
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

39665..40372
DNA (708bp) protein (236aa)
chemotaxis protein CheY n=1 Tax=Segetibacter koreensis RepID=UPI0003650352
LytTR family two component transcriptional regulator
Tax=RBG_16_OP11_Levybacteria_35_11_curated
Displaying items 1-30 of 46 in total

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