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SCN18_13_7_16_R1_B_scaffold_719

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_719_1
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(375..3836)
DNA (3462bp) protein (1154aa)
Methylmalonyl-CoA mutase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMM2_CHIPD
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:KIC94705.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
methylmalonyl-CoA mutase
SCN18_13_7_16_R1_B_scaffold_719_2
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3885..4799
DNA (915bp) protein (305aa)
Ureidoglycolate lyase {ECO:0000313|EMBL:AEW02928.1}; EC=4.3.2.3 {ECO:0000313|EMBL:AEW02928.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Ureidoglycolate lyase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJZ0_NIAKG
ureidoglycolate lyase
SCN18_13_7_16_R1_B_scaffold_719_3
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4911..5243
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J3C2L8_9FLAO
Contig_18, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ21353.1}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_719_4
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5254..5925
DNA (672bp) protein (224aa)
G-D-S-L family lipolytic protein n=1 Tax=Rudanella lutea RepID=UPI00036AE57E
G-D-S-L family lipolytic protein
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:AEV96787.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_13_7_16_R1_B_scaffold_719_5
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6021..6452
DNA (432bp) protein (144aa)
S23 ribosomal protein id=2618939 bin=GWF2_Bacteroidetes_43_63 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
S23 ribosomal protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
SCN18_13_7_16_R1_B_scaffold_719_6
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6515..7336
DNA (822bp) protein (274aa)
Amidohydrolase 2 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJY8_NIAKG
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:AEW02926.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_13_7_16_R1_B_scaffold_719_7
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7383..8162
DNA (780bp) protein (260aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PCA6_CHIPD
short chain dehydrogenase
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACU59489.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCN18_13_7_16_R1_B_scaffold_719_8
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8190..9434
DNA (1245bp) protein (415aa)
L-fucose:H+ symporter permease n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KVT6_SOLCM
L-fucose:H+ symporter permease
L-fucose:H+ symporter permease {ECO:0000313|EMBL:AFD06709.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCN18_13_7_16_R1_B_scaffold_719_9
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9783..12659
DNA (2877bp) protein (959aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
carbamoyl phosphate synthase large subunit n=1 Tax=Niabella aurantiaca RepID=UPI0003613024
carbamoyl phosphate synthase large subunit
SCN18_13_7_16_R1_B_scaffold_719_10
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13006..14346
DNA (1341bp) protein (447aa)
Glutamate dehydrogenase n=1 Tax=Niabella soli DSM 19437 RepID=H1NSG9_9SPHI
glutamate dehydrogenase
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCN18_13_7_16_R1_B_scaffold_719_11
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14742..16253)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EI36_9SPHI
Contig33, whole genome shotgun sequence {ECO:0000313|EMBL:KIO77546.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_719_12
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16633..16902
DNA (270bp) protein (90aa)
Transposase IS116/IS110/IS902 family protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YBS7_9SPHI
Transposase {ECO:0000313|EMBL:EHQ28796.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
transposase IS116/IS110/IS902 family protein
SCN18_13_7_16_R1_B_scaffold_719_13
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17091..17891)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GQI2_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EOR94087.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_719_14
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17972..19159)
DNA (1188bp) protein (396aa)
Glycosyl transferase group 1 id=3306181 bin=GWF2_Bacteroidetes_41_9 species=Formosa sp. AK20 genus=Formosa taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
group 1 glycosyl transferase
Tax=GWA2_Bacteroidetes_40_15_curated
SCN18_13_7_16_R1_B_scaffold_719_15
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19122..20489)
DNA (1368bp) protein (456aa)
Nucleotide sugar dehydrogenase id=3306174 bin=GWF2_Bacteroidetes_41_9 species=Clostridium sp. Maddingley MBC34-26 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
GDP-mannose dehydrogenase
Tax=GWA2_Bacteroidetes_40_15_curated
SCN18_13_7_16_R1_B_scaffold_719_16
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20501..22483)
DNA (1983bp) protein (661aa)
polysaccharide lyase (EC:4.2.2.-)
Polysaccharide lyase, family PL12 {ECO:0000313|EMBL:CAZ96066.1}; EC=4.2.2.- {ECO:0000313|EMBL:CAZ96066.1};; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871; / Dsij).;"
Polysaccharide lyase, family PL12 n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L5A0_ZOBGA
SCN18_13_7_16_R1_B_scaffold_719_17
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22534..22887)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000361EAE5
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:KDS13775.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_719_18
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22835..23614)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000361EAE5
Uncharacterized protein {ECO:0000313|EMBL:EIY61191.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_719_19
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23910..25001)
DNA (1092bp) protein (364aa)
Predicted glycosyltransferase, family I n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NS56_DESTT
glycosyl transferase
Predicted glycosyltransferase, family I {ECO:0000313|EMBL:CCK81817.1}; TaxID=651182 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacula.;" source="Desulfobacula toluolica (strain DSM 7467 / Tol2).;"
SCN18_13_7_16_R1_B_scaffold_719_20
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25237..26568)
DNA (1332bp) protein (444aa)
SCN18_13_7_16_R1_B_scaffold_719_21
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26565..27683)
DNA (1119bp) protein (373aa)
Glycosyltransferase, family I n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NNZ5_DESTT
glycosyltransferase, family I
Glycosyltransferase, family I {ECO:0000313|EMBL:CCK81818.1}; TaxID=651182 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacula.;" source="Desulfobacula toluolica (strain DSM 7467 / Tol2).;"
SCN18_13_7_16_R1_B_scaffold_719_22
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27806..28306)
DNA (501bp) protein (167aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=491915 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Anoxybacillus.;" source="Anoxybacillus flavithermus (strain DSM 21510 / WK1).;"
Serine acetyltransferase n=1 Tax=Anoxybacillus flavithermus NBRC 109594 RepID=R4FEI7_9BACI
cysE; serine acetyltransferase
SCN18_13_7_16_R1_B_scaffold_719_23
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28293..29417)
DNA (1125bp) protein (375aa)
Phosphatidylinositol glycan-class A n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TNV5_METAC
pigA; phosphatidylinositol glycan-class A
Tax=GWA2_RIF03_38_11_curated
SCN18_13_7_16_R1_B_scaffold_719_24
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29500..30924)
DNA (1425bp) protein (475aa)
O-antigen repeat unit transporter n=2 Tax=Parabacteroides distasonis RepID=A6L812_PARD8
O-antigen repeat-containing transporter
Uncharacterized protein {ECO:0000313|EMBL:EKN24400.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
SCN18_13_7_16_R1_B_scaffold_719_25
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30917..31507)
DNA (591bp) protein (197aa)
Acetyltransferase, CysE/LacA/LpxA/NodL family n=3 Tax=Bacteroidales RepID=D7IWN0_9BACE
acetyltransferase
Uncharacterized protein {ECO:0000313|EMBL:EKN24399.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
SCN18_13_7_16_R1_B_scaffold_719_26
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31526..32536)
DNA (1011bp) protein (337aa)
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EFK59786.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EFK59786.1};; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
NAD dependent epimerase/dehydratase family protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VI84_9SPHI
Vi polysaccharide biosynthesis protein VipB/TviC
Displaying 26 items

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