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SCN18_13_7_16_R1_B_scaffold_967

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_967_1
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2..922)
DNA (921bp) protein (307aa)
RagB/SusD domain-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8X4_NIAKG
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AEW02331.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_13_7_16_R1_B_scaffold_967_2
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(942..4331)
DNA (3390bp) protein (1130aa)
TonB-dependent receptor plug n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8X5_NIAKG
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AEW02332.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_13_7_16_R1_B_scaffold_967_3
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4479..5618)
DNA (1140bp) protein (380aa)
Anti-FecI sigma factor, FecR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8X6_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC94830.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
anti-FecI sigma factor FecR
SCN18_13_7_16_R1_B_scaffold_967_4
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5848..6873)
DNA (1026bp) protein (342aa)
FecR protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XSF1_PEDHD
FecR protein
FecR protein {ECO:0000313|EMBL:ACU03496.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCN18_13_7_16_R1_B_scaffold_967_5
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6938..7465)
DNA (528bp) protein (176aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THI2_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW02828.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_13_7_16_R1_B_scaffold_967_6
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7621..9012)
DNA (1392bp) protein (464aa)
Undecaprenyl-phosphate glucose phosphotransferase {ECO:0000313|EMBL:AEV96491.1}; EC=2.7.8.6 {ECO:0000313|EMBL:AEV96491.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Undecaprenyl-phosphate glucose phosphotransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK57_NIAKG
undecaprenyl-phosphate glucose phosphotransferase
SCN18_13_7_16_R1_B_scaffold_967_7
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9100..9915)
DNA (816bp) protein (272aa)
Glycosyl transferase, WecB/TagA/CpsF family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK56_NIAKG
WecB/TagA/CpsF family glycosyl transferase
Glycosyl transferase, WecB/TagA/CpsF family {ECO:0000313|EMBL:AEV96490.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_13_7_16_R1_B_scaffold_967_8
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9987..11255)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYS6_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB49800.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCN18_13_7_16_R1_B_scaffold_967_9
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11271..11846)
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y8U6_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIA85288.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_967_10
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11843..12763)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI0003473540
Uncharacterized protein {ECO:0000313|EMBL:ETZ24570.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_967_11
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12763..13974)
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00035E9C9C
glycosyl transferase family 1
Glycosyl transferase family 1 {ECO:0000313|EMBL:AKD54372.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCN18_13_7_16_R1_B_scaffold_967_12
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13971..14870)
DNA (900bp) protein (300aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_56FAA RepID=F7LW52_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN02150.1}; TaxID=665938 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_56FAA.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_967_13
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14861..15697)
DNA (837bp) protein (279aa)
glycosyl transferase family 2 n=1 Tax=Flavobacteriaceae bacterium S85 RepID=UPI0002559DFC
Uncharacterized protein {ECO:0000313|EMBL:GAL67516.1}; TaxID=504487 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Jejuia.;" source="Jejuia pallidilutea.;"
group 2 family glycosyltransferase
SCN18_13_7_16_R1_B_scaffold_967_14
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15690..16979)
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000379AFB8
hypothetical protein
Tax=CG_Flavo_02
SCN18_13_7_16_R1_B_scaffold_967_15
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16960..17610)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000381135F
Bacterial transferase hexapeptide family protein {ECO:0000313|EMBL:EXZ03244.1}; TaxID=1339276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. DS-208.;"
transferase hexapeptide repeat containing protein
SCN18_13_7_16_R1_B_scaffold_967_16
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17631..18323)
DNA (693bp) protein (231aa)
Acetyltransferase (Isoleucine patch superfamily)-like protein n=1 Tax=Bacillus cereus BDRD-ST196 RepID=C2SUK8_BACCE
Acetyltransferase {ECO:0000313|EMBL:GAL88713.1}; TaxID=504487 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Jejuia.;" source="Jejuia pallidilutea.;"
bacterial transferase hexapeptide family protein
SCN18_13_7_16_R1_B_scaffold_967_17
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18333..19295)
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Flavobacteriaceae bacterium S85 RepID=UPI0002559E01
Uncharacterized protein {ECO:0000313|EMBL:GAL67512.1}; TaxID=504487 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Jejuia.;" source="Jejuia pallidilutea.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_967_18
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19351..20448)
DNA (1098bp) protein (366aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
GDP-mannose 4,6-dehydratase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CA75_SPHS2
GDP-mannose 4,6-dehydratase
SCN18_13_7_16_R1_B_scaffold_967_19
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20517..21455)
DNA (939bp) protein (313aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
GDP-L-fucose synthase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CB05_SPHS2
GDP-L-fucose synthase
SCN18_13_7_16_R1_B_scaffold_967_20
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21499..22065)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003727E49
NusG antitermination factor
NusG antitermination factor {ECO:0000313|EMBL:AEV96482.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_13_7_16_R1_B_scaffold_967_21
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22318..22647)
DNA (330bp) protein (110aa)
Capsular exopolysaccharide family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK47_NIAKG
capsular exopolysaccharide family protein
Capsular exopolysaccharide family {ECO:0000313|EMBL:AEV96481.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 21 items

View Taxonomy