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SCN18_13_7_16_R1_B_scaffold_1197

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_1197_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1094)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DIA4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGF82236.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_1197_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1128..2507)
DNA (1380bp) protein (460aa)
two component Fis family transcriptional regulator; K02481 two-component system, NtrC family, response regulator id=12493049 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Fis family transcriptional regulator
Two Component Transcriptional Regulator, Fis family {ECO:0000313|EMBL:AAZ96150.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCN18_13_7_16_R1_B_scaffold_1197_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2504..4564)
DNA (2061bp) protein (687aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=323261 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848).;"
Signal transduction histidine kinase n=2 Tax=Nitrosococcus oceani RepID=Q3J9N6_NITOC
Signal transduction histidine kinase
SCN18_13_7_16_R1_B_scaffold_1197_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4760..5905)
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036BE83F
Glycosyl transferase family 1 {ECO:0000313|EMBL:KJB97614.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
group 1 glycosyl transferase
SCN18_13_7_16_R1_B_scaffold_1197_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5892..7991)
DNA (2100bp) protein (700aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI0002F6A426
Uncharacterized protein {ECO:0000313|EMBL:KKD00114.1}; TaxID=265726 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium halotolerans.;"
putative dehydrogenase
SCN18_13_7_16_R1_B_scaffold_1197_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8085..9266)
DNA (1182bp) protein (394aa)
Glycosyltransferase 1 protein {ECO:0000313|EMBL:KFC66158.1}; EC=2.4.1.40 {ECO:0000313|EMBL:KFC66158.1};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000380D53D
putative GT4 : distantly related to UDP-GlcNAc: 1L-myo-inositol-1-P a-N-acetylglucoaminyltransferase
SCN18_13_7_16_R1_B_scaffold_1197_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9359..10534)
DNA (1176bp) protein (392aa)
Group 1 glycosyl transferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTP9_9BURK
putative GT4 : distantly related to 1,2-diacylglycerol 3-glucosyltransferase
Putative GT4 : distantly related to 1, 2-diacylglycerol 3-glucosyltransferase {ECO:0000313|EMBL:CCQ72962.1}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
SCN18_13_7_16_R1_B_scaffold_1197_8
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10538..12124)
DNA (1587bp) protein (529aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003819240
Sugar transferase {ECO:0000313|EMBL:EZP72983.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
sugar transferase
SCN18_13_7_16_R1_B_scaffold_1197_9
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12453..13187)
DNA (735bp) protein (245aa)
SCN18_13_7_16_R1_B_scaffold_1197_10
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13212..14264)
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00031F8A33
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ64234.1}; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;"
SCN18_13_7_16_R1_B_scaffold_1197_11
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14691..14912)
DNA (222bp) protein (74aa)
SCN18_13_7_16_R1_B_scaffold_1197_12
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14896..16224)
DNA (1329bp) protein (443aa)
polymerase n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B6CE71
Uncharacterized protein {ECO:0000313|EMBL:KJB93766.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
O-antigen polymerase
SCN18_13_7_16_R1_B_scaffold_1197_13
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16251..17738)
DNA (1488bp) protein (496aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000361AE6D
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABC23885.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
Displaying 13 items

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