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SCN18_13_7_16_R1_B_scaffold_1691

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_1691_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(26..850)
DNA (825bp) protein (275aa)
N-acetyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9S6_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KCZ48144.1}; TaxID=1280944 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. CY54-11-8.;"
N-acetyltransferase
SCN18_13_7_16_R1_B_scaffold_1691_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(968..1699)
DNA (732bp) protein (244aa)
UPI0003CE6B8A related cluster n=1 Tax=unknown RepID=UPI0003CE6B8A
Uncharacterized protein {ECO:0000313|EMBL:ESY76874.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_1691_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1724..2863)
DNA (1140bp) protein (380aa)
UPI0003D04A80 related cluster n=1 Tax=unknown RepID=UPI0003D04A80
Uncharacterized protein {ECO:0000313|EMBL:ESZ65901.1}; TaxID=1287089 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C131B0.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_1691_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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3102..3572
DNA (471bp) protein (157aa)
aldehyde-activating protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00036AFEAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG77228.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCN18_13_7_16_R1_B_scaffold_1691_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3659..4405)
DNA (747bp) protein (249aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1447233 species="Bacteria; environmental samples.;" source="uncultured bacterium 12AC_lac13.;"
Pseudouridine synthase (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z7Q5_9PROT
SCN18_13_7_16_R1_B_scaffold_1691_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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4474..4803
DNA (330bp) protein (110aa)
Antibiotic biosynthesis monooxygenase domain protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C4W6_HYPNA
antibiotic biosynthesis monooxygenase domain-containing protein
Antibiotic biosynthesis monooxygenase domain-containing protein {ECO:0000313|EMBL:KCZ96561.1}; TaxID=1280951 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas hirschiana VP5.;"
SCN18_13_7_16_R1_B_scaffold_1691_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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4800..5249
DNA (450bp) protein (150aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1447233 species="Bacteria; environmental samples.;" source="uncultured bacterium 12AC_lac13.;"
CMP/dCMP deaminase zinc-binding n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQT5_PARL1
tRNA-specific adenosine-34 deaminase
SCN18_13_7_16_R1_B_scaffold_1691_8
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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5324..5992
DNA (669bp) protein (223aa)
Glutathione S-transferase domain n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQJ7_PARL1
Glutathione S-transferase family protein {ECO:0000313|EMBL:CDO61170.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
glutathione S-transferase domain-containing protein
SCN18_13_7_16_R1_B_scaffold_1691_9
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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6001..7464
DNA (1464bp) protein (488aa)
Major facilitator superfamily MFS_1 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWD6_PARL1
major facilitator superfamily transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABS64219.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_13_7_16_R1_B_scaffold_1691_10
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7479..8228)
DNA (750bp) protein (250aa)
Integral membrane protein TerC n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SSH5_NITWN
integral membrane protein TerC
Integral membrane protein TerC {ECO:0000313|EMBL:ABA04766.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCN18_13_7_16_R1_B_scaffold_1691_11
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8251..8871)
DNA (621bp) protein (207aa)
Phosphoesterase PA-phosphatase related id=3729048 bin=GWC2_Syntrophus__56_31 species=Chlorobium limicola genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
PA-phosphatase-like phosphoesterase
Tax=GWC2_Syntrophus_56_31_curated
SCN18_13_7_16_R1_B_scaffold_1691_12
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9015..10256
DNA (1242bp) protein (414aa)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:CDO60389.1}; EC=1.3.8.7 {ECO:0000313|EMBL:CDO60389.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
PREDICTED: acyl-CoA dehydrogenase family member 10-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C119B4
acyl-CoA dehydrogenase domain-containing protein
SCN18_13_7_16_R1_B_scaffold_1691_13
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10333..11898)
DNA (1566bp) protein (522aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQT8_PARL1
PAS/PAC sensor signal transduction histidine kinase
SCN18_13_7_16_R1_B_scaffold_1691_14
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12043..12546)
DNA (504bp) protein (168aa)
Aminoglycoside phosphotransferase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQQ8_PARL1
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:GAK44984.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
aminoglycoside phosphotransferase
SCN18_13_7_16_R1_B_scaffold_1691_15
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12534..13124)
DNA (591bp) protein (197aa)
Aminoglycoside phosphotransferase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQQ8_PARL1
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ABS62241.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_13_7_16_R1_B_scaffold_1691_16
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13188..14465)
DNA (1278bp) protein (426aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
Phosphoribosylamine--glycine ligase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07HQ2_RHOP5
SCN18_13_7_16_R1_B_scaffold_1691_17
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14539..15942
DNA (1404bp) protein (468aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IF68_XANP2
xseA; exodeoxyribonuclease VII large subunit
SCN18_13_7_16_R1_B_scaffold_1691_18
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15989..16216
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IF69_XANP2
hypothetical protein
Tax=RBG_16_Alphaproteobacteria_64_48_curated
SCN18_13_7_16_R1_B_scaffold_1691_19
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16235..17071
DNA (837bp) protein (279aa)
Peptidase M23B n=1 Tax=alpha proteobacterium BAL199 RepID=A8U3C5_9PROT
Peptidase M23B {ECO:0000313|EMBL:EDP61316.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
peptidase M23
SCN18_13_7_16_R1_B_scaffold_1691_20
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17014..17508)
DNA (495bp) protein (165aa)
Lipid A biosynthesis acyltransferase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AEX9_AZOBR
Lauroyl acyltransferase {ECO:0000313|EMBL:EWY40357.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
lipid A biosynthesis acyltransferase
Displaying 20 items

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