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SCN18_13_7_16_R1_B_scaffold_156

Search features with annotation key words

Displaying items 1-30 of 121 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_156_1
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..93
DNA (93bp) protein (31aa)
Transposase n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SYT8_JANMA
transposase
Transposase {ECO:0000313|EMBL:ABR89956.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
SCN18_13_7_16_R1_B_scaffold_156_2
CN-SCN_Acidovorax_22x, CN-SCN_Acidovorax_22x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69..767)
DNA (699bp) protein (233aa)
Metal-dependent hydrolases of the beta-lactamase superfamily I n=1 Tax=uncultured bacterium A1Q1_fos_550 RepID=L7VVJ7_9BACT
metallo-beta-lactamase domain-containing protein
Metal-dependent hydrolases of the beta-lactamase superfamily I {ECO:0000313|EMBL:AGC71534.1}; TaxID=1256583 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_550.;"
SCN18_13_7_16_R1_B_scaffold_156_3
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(791..1906)
DNA (1116bp) protein (372aa)
NlpBDapX family lipoprotein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T3W7_ACIDE
Lipoprotein {ECO:0000313|EMBL:KJA09348.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
NlpBDapX lipoprotein
SCN18_13_7_16_R1_B_scaffold_156_4
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1983..2879)
DNA (897bp) protein (299aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U262_ALIDB
dihydrodipicolinate synthase
SCN18_13_7_16_R1_B_scaffold_156_5
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2946..3518)
DNA (573bp) protein (191aa)
Putative SAM-dependent methyltransferase Bucepa02006346 n=1 Tax=uncultured bacterium A1Q1_fos_1134 RepID=L7W1X1_9BACT
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCN18_13_7_16_R1_B_scaffold_156_6
CN-SCN_Comamonas_56x, CN-SCN_Comamonas_56x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3614..5578
DNA (1965bp) protein (655aa)
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00938};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; TaxID=667019 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter.;" source="Curvibacter putative symbiont of Hydra magnipapillata.;"
DNA topoisomerase 4 subunit B n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YGA7_9BURK
parE; DNA topoisomerase IV subunit B
SCN18_13_7_16_R1_B_scaffold_156_7
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5652..5963
DNA (312bp) protein (104aa)
Prevent-host-death family protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F6V9_ACIC5
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:ACO32997.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
SCN18_13_7_16_R1_B_scaffold_156_8
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5960..6385
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QC17_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CDW92339.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_156_9
CN-SCN_Comamonas_56x, CN-SCN_Comamonas_56x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6451..8844
DNA (2394bp) protein (798aa)
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00936};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
DNA topoisomerase IV subunit A (EC:5.99.1.3)
DNA topoisomerase IV subunit A n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000364DECB
SCN18_13_7_16_R1_B_scaffold_156_10
CN-SCN_Comamonas_56x, CN-SCN_Comamonas_56x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8844..9038
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XEU1_VARPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU50615.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCN18_13_7_16_R1_B_scaffold_156_11
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9042..9404)
DNA (363bp) protein (121aa)
Carboxymuconolactone decarboxylase n=1 Tax=mine drainage metagenome RepID=T0ZQW2_9ZZZZ
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:EQD32205.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
alkylhydroperoxidase
SCN18_13_7_16_R1_B_scaffold_156_12
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9450..9920)
DNA (471bp) protein (157aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Alkylhydroperoxidase like protein, AhpD family n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TS15_ALIDB
alkylhydroperoxidase
SCN18_13_7_16_R1_B_scaffold_156_13
SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9951..10340)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G598_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB86444.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_13_7_16_R1_B_scaffold_156_14
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10654..12546
DNA (1893bp) protein (631aa)
Phosphomethylpyrimidine synthase {ECO:0000255|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000255|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00089}; Short=HMP-P synthase {ECO:0000255|HAMAP-Rule:MF_00089};; Short=HMP-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00089};; Short=HMPP synthase {ECO:0000255|HAMAP-Rule:MF_00089};; Thiamine biosynthesis protein ThiC {ECO:0000255|HAMAP-Rule:MF_00089}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
phosphomethylpyrimidine synthase n=1 Tax=Variovorax paradoxus RepID=UPI00037F608F
thiamine biosynthesis protein ThiC
SCN18_13_7_16_R1_B_scaffold_156_15
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12611..13750
DNA (1140bp) protein (380aa)
Thiamine biosynthesis oxidoreductase ThiO, putative n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SG82_METPP
thiamine biosynthesis oxidoreductase ThiO
Thiamine biosynthesis oxidoreductase ThiO {ECO:0000313|EMBL:BAP88444.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
SCN18_13_7_16_R1_B_scaffold_156_16
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13747..13974
DNA (228bp) protein (76aa)
Sulfur transfer protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SG81_METPP
sulfur transfer protein
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:EWS57256.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
SCN18_13_7_16_R1_B_scaffold_156_17
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14015..15361)
DNA (1347bp) protein (449aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037B50A6
putative uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:BAP89198.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
SCN18_13_7_16_R1_B_scaffold_156_18
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15565..15882
DNA (318bp) protein (106aa)
Sulfur transfer protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SG81_METPP
Uncharacterized protein {ECO:0000313|EMBL:KDB53126.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
sulfur transfer protein
SCN18_13_7_16_R1_B_scaffold_156_19
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15897..16496
DNA (600bp) protein (200aa)
NAD(P)H dehydrogenase (Quinone) n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WP03_METH6
NAD(P)H dehydrogenase (Quinone) {ECO:0000313|EMBL:EYR67009.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
NAD(P)H dehydrogenase (Quinone)
SCN18_13_7_16_R1_B_scaffold_156_20
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16505..17329
DNA (825bp) protein (275aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
Thiazole synthase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SG80_METPP
thiamine biosynthesis protein ThiG
SCN18_13_7_16_R1_B_scaffold_156_21
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17326..19068
DNA (1743bp) protein (581aa)
phosphomethylpyrimidine kinase / thiamine-phosphate pyrophosphorylase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase / thiamine-phosphate pyrophosphorylase {ECO:0000313|EMBL:ABM94568.1}; EC=2.7.4.7 {ECO:0000313|EMBL:ABM94568.1};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
Phosphomethylpyrimidine kinase / thiamine-phosphate pyrophosphorylase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SG79_METPP
SCN18_13_7_16_R1_B_scaffold_156_22
CN-SCN_Acidovorax_22x, CN-SCN_Acidovorax_22x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19111..19950
DNA (840bp) protein (280aa)
Candidate phosphomethylpyrimidine kinase (HMP-phosphate kinase) n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y0G9_RAMTT
thiD; phosphomethylpyrimidine kinase
Tax=CG_Rhodof_04
SCN18_13_7_16_R1_B_scaffold_156_23
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20188..21078
DNA (891bp) protein (297aa)
Two component transcriptional regulator, AraC family n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BZY3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFX67710.1}; TaxID=1395571 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taeanensis MS-3.;"
AraC family transcriptional regulator
SCN18_13_7_16_R1_B_scaffold_156_24
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21172..23523
DNA (2352bp) protein (784aa)
Putative uncharacterized protein n=2 Tax=Chloroflexus RepID=A9WJ94_CHLAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABY34371.1}; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).;"
SCN18_13_7_16_R1_B_scaffold_156_25
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23551..23940
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WUM0_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
SCN18_13_7_16_R1_B_scaffold_156_26
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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23900..24175
DNA (276bp) protein (92aa)
SCN18_13_7_16_R1_B_scaffold_156_27
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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24187..24684
DNA (498bp) protein (166aa)
SCN18_13_7_16_R1_B_scaffold_156_28
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24773..26077
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI00036EAEC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC17268.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
SCN18_13_7_16_R1_B_scaffold_156_29
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26190..26936
DNA (747bp) protein (249aa)
Bll5312 protein n=1 Tax=Burkholderia sp. RPE64 RepID=R4X431_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KDB07801.1}; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. lig30.;"
Bll5312 protein
SCN18_13_7_16_R1_B_scaffold_156_30
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27144..28178
DNA (1035bp) protein (345aa)
acetylpolyamine aminohydrolase n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI00037D396B
Histone deacetylase superfamily protein {ECO:0000313|EMBL:GAD24174.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
histone deacetylase superfamily protein
Displaying items 1-30 of 121 in total

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