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SCN18_13_7_16_R1_B_scaffold_567

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_567_1
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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146..805
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) RepID=Q2STL2_BURTA
predicted restriction endonuclease
Predicted restriction endonuclease {ECO:0000313|EMBL:BAO82451.1}; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium B1.;"
SCN18_13_7_16_R1_B_scaffold_567_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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914..1216
DNA (303bp) protein (101aa)
HipA N-terminal domain protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SET6_GALCS
HipA N-terminal domain-containing protein
Tax=GWA2_Gallionellales_54_124_curated
SCN18_13_7_16_R1_B_scaffold_567_3
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1232..1453
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Geobacter sulfurreducens RepID=D7AJE6_GEOSK
Uncharacterized protein {ECO:0000313|EMBL:KIE42227.1}; TaxID=1510391 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_567_4
CN-SCN_Rubrivivax_131x, CN-SCN_Rubrivivax_131x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1453..2079
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Ralstonia solanacearum RepID=UPI0003776064
Uncharacterized protein {ECO:0000313|EMBL:KGH07017.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_567_5
SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2246..4417)
DNA (2172bp) protein (724aa)
Primase 2 n=1 Tax=Acidovorax sp. NO-1 RepID=H0C2Y8_9BURK
Primase 2 {ECO:0000313|EMBL:GAO26160.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
primase 2
SCN18_13_7_16_R1_B_scaffold_567_6
unknown

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comp(4422..4631)
DNA (210bp) protein (70aa)

This feature has no annotations

SCN18_13_7_16_R1_B_scaffold_567_7
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4696..4902)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EHL1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:GAO22713.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_567_8
unknown

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comp(4997..5929)
DNA (933bp) protein (311aa)

This feature has no annotations

SCN18_13_7_16_R1_B_scaffold_567_9
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6105..6437)
DNA (333bp) protein (111aa)
Uncharacterized conserved small protein-like n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NR38_9DELT
hypothetical protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
SCN18_13_7_16_R1_B_scaffold_567_10
SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6434..6748)
DNA (315bp) protein (105aa)
Transcriptional regulator, XRE family n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WZW7_THIK1
XRE family transcriptional regulator
Tax=CG_Rhodof_04
SCN18_13_7_16_R1_B_scaffold_567_11
SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6812..7093)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WB35_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM43460.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCN18_13_7_16_R1_B_scaffold_567_12
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7080..7358)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WB36_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM43461.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCN18_13_7_16_R1_B_scaffold_567_13
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7410..8741)
DNA (1332bp) protein (444aa)
Integrase family protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G7H9_ALIDK
Preprotein translocase {ECO:0000313|EMBL:KJA09900.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
integrase family protein
SCN18_13_7_16_R1_B_scaffold_567_14
SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9122..9403)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WB35_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM43460.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCN18_13_7_16_R1_B_scaffold_567_15
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9390..9668)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WB36_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM43461.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCN18_13_7_16_R1_B_scaffold_567_16
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9748..11979)
DNA (2232bp) protein (744aa)
Penicillin-binding protein 1C n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VS12_POLNA
penicillin-binding protein 1C
Penicillin-binding protein 1C {ECO:0000313|EMBL:ABM38440.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
SCN18_13_7_16_R1_B_scaffold_567_17
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12158..18130)
DNA (5973bp) protein (1991aa)
Alpha-2-macroglobulin domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GC56_ALIDK
Alpha-2-macroglobulin domain protein {ECO:0000313|EMBL:AEB83630.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
alpha-2-macroglobulin domain-containing protein
SCN18_13_7_16_R1_B_scaffold_567_18
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18206..19198)
DNA (993bp) protein (331aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJA3_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR70058.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_567_19
SCN_Rubrivivax_15x, SCN_Rubrivivax_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19241..20329)
DNA (1089bp) protein (363aa)
ttuC2; tartrate dehydrogenase oxidoreduct (EC:1.1.1.93)
Probable tartrate dehydrogenase oxidoreductase protein {ECO:0000313|EMBL:CAD18147.1}; EC=1.1.1.93 {ECO:0000313|EMBL:CAD18147.1};; TaxID=267608 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (strain GMI1000) (Pseudomonas solanacearum).;"
Probable tartrate dehydrogenase oxidoreductase protein n=1 Tax=Ralstonia solanacearum (strain GMI1000) RepID=Q8XR65_RALSO
SCN18_13_7_16_R1_B_scaffold_567_20
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20448..21371
DNA (924bp) protein (308aa)
LysR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI000361471F
LysR family transcriptional regulator {ECO:0000313|EMBL:KDB51080.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
LysR family transcriptional regulator
SCN18_13_7_16_R1_B_scaffold_567_21
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21385..22833)
DNA (1449bp) protein (483aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
argininosuccinate lyase (EC:4.3.2.1)
argininosuccinate lyase n=1 Tax=Acidovorax avenae RepID=UPI00036CDDC0
SCN18_13_7_16_R1_B_scaffold_567_22
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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22932..23987
DNA (1056bp) protein (352aa)
Candidate histidine kinase, classic n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y5U5_RAMTT
histidine kinase
Candidate histidine kinase, classic {ECO:0000313|EMBL:AEG93979.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCN18_13_7_16_R1_B_scaffold_567_23
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23984..24724
DNA (741bp) protein (247aa)
Candidate response regulator, LytTR n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y5U4_RAMTT
response regulator LytTR
Candidate response regulator, LytTR {ECO:0000313|EMBL:AEG93978.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCN18_13_7_16_R1_B_scaffold_567_24
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24762..25667
DNA (906bp) protein (302aa)
hemC; porphobilinogen deaminase (EC:2.5.1.61)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002D799D6
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCN18_13_7_16_R1_B_scaffold_567_25
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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25684..26526
DNA (843bp) protein (281aa)
Uroporphyrinogen-III synthase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G3X7_ALIDK
uroporphyrinogen-III synthase
Tax=GWA2_Curvibacter_64_110_curated
SCN18_13_7_16_R1_B_scaffold_567_26
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26523..27629
DNA (1107bp) protein (369aa)
Putative uncharacterized protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TNP3_ACIAC
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
SCN18_13_7_16_R1_B_scaffold_567_27
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27644..28552
DNA (909bp) protein (303aa)
HemY domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TUE0_ALIDB
HemY domain-containing protein
HemY domain protein {ECO:0000313|EMBL:AEB84036.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_13_7_16_R1_B_scaffold_567_28
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28519..28824
DNA (306bp) protein (102aa)
Putative enzyme of heme biosynthesis n=1 Tax=Acidovorax sp. CF316 RepID=J0KF08_9BURK
Putative enzyme of heme biosynthesis {ECO:0000313|EMBL:EJE49838.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
HemY domain-containing protein
SCN18_13_7_16_R1_B_scaffold_567_29
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28892..29620
DNA (729bp) protein (243aa)
Transcriptional regulator, GntR family n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SEE4_METPP
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABM93933.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
SCN18_13_7_16_R1_B_scaffold_567_30
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29706..30617
DNA (912bp) protein (304aa)
Probable 5-dehydro-4-deoxyglucarate dehydratase {ECO:0000256|HAMAP-Rule:MF_00694}; EC=4.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00694};; 5-keto-4-deoxy-glucarate dehydratase {ECO:0000256|HAMAP-Rule:MF_00694}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
Probable 5-dehydro-4-deoxyglucarate dehydratase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XX57_RAMTT
5-dehydro-4-deoxyglucarate dehydratase
Displaying items 1-30 of 67 in total

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