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SCN18_13_7_16_R1_B_scaffold_10

Search features with annotation key words

Displaying items 1-30 of 477 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_10_1
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..237
DNA (237bp) protein (79aa)
UPI0003D68285 related cluster n=1 Tax=unknown RepID=UPI0003D68285
Hypothetical protein YggS
Uncharacterized protein {ECO:0000313|EMBL:AHC48174.1}; TaxID=1216976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans NBRC 15126 = ATCC 27061.;"
SCN18_13_7_16_R1_B_scaffold_10_2
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

323..1390
DNA (1068bp) protein (356aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031FEBBA
Membrane protein {ECO:0000313|EMBL:AHY58610.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
membrane protein
SCN18_13_7_16_R1_B_scaffold_10_3
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1435..2166)
DNA (732bp) protein (244aa)
Histidine utilization repressor n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L4Z1_9GAMM
Histidine utilization repressor {ECO:0000313|EMBL:EED39060.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
transcriptional regulator, histidine utilization repressor, GntR family
SCN18_13_7_16_R1_B_scaffold_10_4
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2186..3556)
DNA (1371bp) protein (457aa)
N-formimino-L-glutamate deiminase n=1 Tax=Xanthomonas sacchari RepID=UPI000262AB64
N-formimino-L-glutamate deiminase
N-formimino-L-glutamate deiminase {ECO:0000313|EMBL:AJC44907.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
SCN18_13_7_16_R1_B_scaffold_10_5
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3618..4829
DNA (1212bp) protein (404aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; TaxID=434928 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. citri.;"
Imidazolonepropionase n=1 Tax=Xanthomonas fuscans subsp. fuscans RepID=U4M1G4_9XANT
hutI; probable imidazolonepropionase
SCN18_13_7_16_R1_B_scaffold_10_6
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4910..6448
DNA (1539bp) protein (513aa)
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
histidine ammonia-lyase (EC:4.3.1.3)
histidine ammonia-lyase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000312F40C
SCN18_13_7_16_R1_B_scaffold_10_7
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6543..7394
DNA (852bp) protein (284aa)
formimidoylglutamase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031B2BD9
Formimidoylglutamase {ECO:0000313|EMBL:EQM83214.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_10_8
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7391..9058
DNA (1668bp) protein (556aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
urocanate hydratase (EC:4.2.1.49)
urocanate hydratase n=1 Tax=Dyella japonica RepID=UPI0002E14830
SCN18_13_7_16_R1_B_scaffold_10_9
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9156..9956
DNA (801bp) protein (267aa)
Restriction endonuclease n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SVS4_XANCT
Restriction endonuclease {ECO:0000313|EMBL:CCP40126.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_10_10
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9966..10385)
DNA (420bp) protein (140aa)
Putative membrane protein n=1 Tax=Pseudomonas sp. GM84 RepID=J3IYK8_9PSED
Putative membrane protein {ECO:0000313|EMBL:EJN40331.1}; Flags: Precursor;; TaxID=1144340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM84.;"
SURF4 domain-containing protein
SCN18_13_7_16_R1_B_scaffold_10_11
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10511..12748
DNA (2238bp) protein (746aa)
Hydrolase, coce/nond family n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U4N6_MYXSD
Peptidase S15 {ECO:0000313|EMBL:EYR70055.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hydrolase, coce/nond family
SCN18_13_7_16_R1_B_scaffold_10_12
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12745..13275
DNA (531bp) protein (177aa)
Putative acetyltransferase, GNAT family n=1 Tax=Pseudomonas entomophila (strain L48) RepID=Q1I8I2_PSEE4
acetyltransferase
Putative acetyltransferase, GNAT family {ECO:0000313|EMBL:CAK16046.1}; TaxID=384676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas entomophila (strain L48).;"
SCN18_13_7_16_R1_B_scaffold_10_13
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13388..14113)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000377DC45
Uncharacterized protein {ECO:0000313|EMBL:AKC88148.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_10_14
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14221..14490)
DNA (270bp) protein (90aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030643DC
Membrane protein {ECO:0000313|EMBL:AHY57460.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_10_15
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15198..16262)
DNA (1065bp) protein (355aa)
Beta-lactamase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LAE2_9GAMM
Beta-lactamase {ECO:0000313|EMBL:EED37789.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
beta-lactamase
SCN18_13_7_16_R1_B_scaffold_10_16
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17267..19744)
DNA (2478bp) protein (826aa)
peptidase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EC8390
Exported oligopeptidase {ECO:0000313|EMBL:EZP45517.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
peptidase S9 prolyl oligopeptidase active site domain-containing protein
SCN18_13_7_16_R1_B_scaffold_10_17
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19972..20982
DNA (1011bp) protein (337aa)
Uncharacterized protein n=7 Tax=Xanthomonas RepID=Q8PME3_XANAC
Uncharacterized protein {ECO:0000313|EMBL:GAE55112.1}; TaxID=1418095 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni MAFF 301420.;"
GGDEF domain protein
SCN18_13_7_16_R1_B_scaffold_10_18
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21422..22120)
DNA (699bp) protein (233aa)
Outer membrane protein omp38 n=3 Tax=Xanthomonas campestris pv. translucens RepID=L0T4R4_XANCT
Stenotrophomonas maltophilia strain ZBG7B contig_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIP87509.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
cell envelope biogenesis protein OmpA
SCN18_13_7_16_R1_B_scaffold_10_19
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22525..22968)
DNA (444bp) protein (148aa)
Uncharacterized protein n=2 Tax=Xanthomonas RepID=V7ZCF2_9XANT
Uncharacterized protein {ECO:0000313|EMBL:AKC87866.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_10_20
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23076..24758
DNA (1683bp) protein (561aa)
Long-chain fatty acid--CoA ligase {ECO:0000313|EMBL:EQM87489.1}; EC=6.2.1.3 {ECO:0000313|EMBL:EQM87489.1};; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
Long-chain fatty acid--CoA ligase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5L5D7_STEMA
fadD; long-chain fatty acyl CoA ligase
SCN18_13_7_16_R1_B_scaffold_10_21
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24917..25792
DNA (876bp) protein (292aa)
Enoyl-CoA hydratase n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7ZCN2_9XANT
Strain LMCP11 contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ23833.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;"
Enoyl-CoA hydratase/carnithine racemase
SCN18_13_7_16_R1_B_scaffold_10_22
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25817..27991)
DNA (2175bp) protein (725aa)
rpfC; Sensory/regulatory protein rpfC (EC:2.7.3.-)
ATPase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D653D0
ATPase {ECO:0000313|EMBL:KDE89731.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
SCN18_13_7_16_R1_B_scaffold_10_23
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27993..29054)
DNA (1062bp) protein (354aa)
divalent ion tolerance protein CutA n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00035D4D63
Cation tolerance protein CutA {ECO:0000313|EMBL:AHY59146.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
response regulator receiver modulated metal dependent phosphohydrolase
SCN18_13_7_16_R1_B_scaffold_10_24
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29249..30781)
DNA (1533bp) protein (511aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
lysyl-tRNA synthetase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F5CEA5
lysyl-tRNA synthetase, class II
SCN18_13_7_16_R1_B_scaffold_10_25
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30888..31814)
DNA (927bp) protein (309aa)
Peptide chain release factor 2 n=2 Tax=Xanthomonas RepID=RF2_XANC5
prfB; peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=925776 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas perforans 91-118.;"
SCN18_13_7_16_R1_B_scaffold_10_26
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31936..32055)
DNA (120bp) protein (40aa)
SCN18_13_7_16_R1_B_scaffold_10_27
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32181..33326
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K0U4_STEMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM52558.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
SCN18_13_7_16_R1_B_scaffold_10_28
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33454..34809
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KS74_STEMA
Uncharacterized protein {ECO:0000313|EMBL:KFN51494.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_10_29
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35212..36081)
DNA (870bp) protein (290aa)
LytTR family transcriptional regulator n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI0003607C44
LytTR family transcriptional regulator {ECO:0000313|EMBL:AKC87808.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
LytTR family transcriptional regulator
SCN18_13_7_16_R1_B_scaffold_10_30
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36170..37453
DNA (1284bp) protein (428aa)
Putative membrane protein n=1 Tax=Xanthomonas citri pv. mangiferaeindicae LMG 941 RepID=H8FFT9_XANCI
Putative membrane protein {ECO:0000313|EMBL:CCG37226.1}; TaxID=1156940 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. mangiferaeindicae LMG 941.;"
inner membrane protein
Displaying items 1-30 of 477 in total

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