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SCN18_13_7_16_R1_B_scaffold_502

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R1_B_scaffold_502_1
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..148
DNA (147bp) protein (49aa)
Transposase n=1 Tax=Mycobacterium smegmatis MKD8 RepID=L8FAT7_MYCSM
Transposase {ECO:0000313|EMBL:ELQ88560.1}; TaxID=1214915 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis MKD8.;"
transposase
SCN18_13_7_16_R1_B_scaffold_502_2
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(572..829)
DNA (258bp) protein (86aa)
SCN18_13_7_16_R1_B_scaffold_502_3
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(826..1656)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 135MFCol5.1 RepID=UPI00037BDDAD
SCN18_13_7_16_R1_B_scaffold_502_4
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1798..2664)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AYT6_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ90873.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCN18_13_7_16_R1_B_scaffold_502_5
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3001..3498)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. HPH0547 RepID=S3BSY8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD91814.1}; TaxID=1203592 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HPH0547.;"
transcriptional regulator
SCN18_13_7_16_R1_B_scaffold_502_6
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3589..4560
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PCQ9_9ACTO
daunorubicin resistance ABC transporter ATP-binding subunit
Daunorubicin resistance ABC transporter ATP-binding subunit {ECO:0000313|EMBL:ACU97487.1}; TaxID=471857 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 /; NBRC 12207 / P101).;"
SCN18_13_7_16_R1_B_scaffold_502_7
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4557..5372
DNA (816bp) protein (272aa)
ABC-2 type transporter n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AZ04_FRADG
ABC-2 type transporter
Tax=RBG_13_Actinobacteria_55_18_curated
SCN18_13_7_16_R1_B_scaffold_502_8
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5496..5756
DNA (261bp) protein (87aa)
SCN18_13_7_16_R1_B_scaffold_502_9
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5788..6090)
DNA (303bp) protein (101aa)
SCN18_13_7_16_R1_B_scaffold_502_10
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6116..6739)
DNA (624bp) protein (208aa)
NADPH-dependent FMN reductase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FFG9_CONWI
NADPH-dependent FMN reductase
NADPH-dependent FMN reductase {ECO:0000313|EMBL:ADB53762.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCN18_13_7_16_R1_B_scaffold_502_11
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6815..7396
DNA (582bp) protein (194aa)
MarR-family transcriptional regulator n=1 Tax=Streptomyces sp. SPB74 RepID=B5G8B4_9ACTO
Transcriptional regulator {ECO:0000313|EMBL:KJE20550.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
transcriptional regulator
SCN18_13_7_16_R1_B_scaffold_502_12
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7639..8277
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B6G2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84149.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_502_13
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8274..9032
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7S8L5_PROA4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV90887.1}; TaxID=1171373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM; 6432 / NBRC 12425 / NCIMB 8070).;"
SCN18_13_7_16_R1_B_scaffold_502_14
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8983..9570)
DNA (588bp) protein (196aa)
SCN18_13_7_16_R1_B_scaffold_502_15
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9549..10508)
DNA (960bp) protein (320aa)
Mrr restriction system protein n=1 Tax=Rhodococcus opacus M213 RepID=K8XRQ4_RHOOP
Mrr restriction system protein {ECO:0000313|EMBL:EKT79740.1}; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
Mrr restriction system protein
SCN18_13_7_16_R1_B_scaffold_502_trna_1
unknown

Not on your lists

10895..10967
DNA (73bp)
transferRNA Lys
SCN18_13_7_16_R1_B_scaffold_502_16
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11044..12315)
DNA (1272bp) protein (424aa)
ATPase (AAA+ superfamily)-like protein n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BZ27_XYLCX
ATPase (AAA+ superfamily)-like protein
ATPase (AAA+ superfamily)-like protein {ECO:0000313|EMBL:ACZ31924.1}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
SCN18_13_7_16_R1_B_scaffold_502_17
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12554..13792)
DNA (1239bp) protein (413aa)
diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC:1.1.1.193 3.5.4.26)
DeoR family transcriptional regulator n=1 Tax=Streptomyces sp. CNB091 RepID=UPI00036AA5C4
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1573406 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MNU77.;"
SCN18_13_7_16_R1_B_scaffold_502_18
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13847..14614)
DNA (768bp) protein (256aa)
Extradiol ring-cleavage dioxygenase class III protein subunit B n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X998_NAKMY
extradiol ring-cleavage dioxygenase class III protein subunit B
Extradiol ring-cleavage dioxygenase class III protein subunit B {ECO:0000313|EMBL:ACV77166.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCN18_13_7_16_R1_B_scaffold_502_19
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14778..15392
DNA (615bp) protein (205aa)
Transcriptional regulator, MarR family n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X997_NAKMY
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ACV77165.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCN18_13_7_16_R1_B_scaffold_502_20
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15685..16794
DNA (1110bp) protein (370aa)
Alginate regulatory protein AlgP n=1 Tax=Pseudomonas aeruginosa B136-33 RepID=M9S7U8_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:KEP23441.1}; TaxID=1497974 species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
algP; alginate regulatory protein AlgP
SCN18_13_7_16_R1_B_scaffold_502_21
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16910..18340)
DNA (1431bp) protein (477aa)
tnaA; tryptophanase (EC:4.1.99.1)
Tryptophanase {ECO:0000313|EMBL:ABL81137.1}; EC=4.1.99.1 {ECO:0000313|EMBL:ABL81137.1};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Tryptophanase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SH52_NOCSJ
SCN18_13_7_16_R1_B_scaffold_502_22
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18444..19712
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000363E1B1
EAL domain protein {ECO:0000313|EMBL:KJF15507.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
diguanylate phosphodiesterase
SCN18_13_7_16_R1_B_scaffold_502_23
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19718..20704)
DNA (987bp) protein (329aa)
Membrane-bound lytic murein transglycosylase F n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VYH9_9ACTO
Membrane-bound lytic murein transglycosylase F
Membrane-bound lytic murein transglycosylase F {ECO:0000313|EMBL:AGZ41837.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCN18_13_7_16_R1_B_scaffold_502_24
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20701..22677)
DNA (1977bp) protein (659aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036BC958
Phytochrome-like protein cph2
Phytochrome-like protein cph2 {ECO:0000313|EMBL:AGZ41838.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCN18_13_7_16_R1_B_scaffold_502_25
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22818..24695)
DNA (1878bp) protein (626aa)
AMP-dependent synthetase n=1 Tax=Streptomyces RepID=UPI0001FFFC97
Dicarboxylate-CoA ligase PimA {ECO:0000313|EMBL:EFK98867.1}; TaxID=591157 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. (strain SPB78).;"
putative fatty-acid--CoA ligase
SCN18_13_7_16_R1_B_scaffold_502_26
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24805..26097
DNA (1293bp) protein (431aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LU61_ACIC1
SCN18_13_7_16_R1_B_scaffold_502_27
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26239..26589
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sp. SPB78 RepID=D9UR59_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EFL00193.1}; TaxID=591157 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. (strain SPB78).;"
hypothetical protein
SCN18_13_7_16_R1_B_scaffold_502_28
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26586..27233
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI000367E256
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ39386.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCN18_13_7_16_R1_B_scaffold_502_29
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27247..27537
DNA (291bp) protein (97aa)
Displaying items 1-30 of 48 in total

View Taxonomy