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SCN18_13_7_16_R5_B_scaffold_639

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R5_B_scaffold_639_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..521
DNA (519bp) protein (173aa)
Putative agmatine ureohydrolase {ECO:0000313|EMBL:KFC63916.1}; EC=3.5.3.11 {ECO:0000313|EMBL:KFC63916.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
agmatinase n=1 Tax=Thalassospira lucentensis RepID=UPI0003B69299
agmatinase
SCN18_13_7_16_R5_B_scaffold_639_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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767..1999
DNA (1233bp) protein (411aa)
Arabinose polymer transporter n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P5J6_AZOS1
Putative efflux protein MFS family protein {ECO:0000313|EMBL:KFC63918.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
araJ; arabinose polymer transporter
SCN18_13_7_16_R5_B_scaffold_639_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2014..2613)
DNA (600bp) protein (200aa)
Transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0GVC3_RHILT
Transcriptional regulatory protein {ECO:0000313|EMBL:KFC63919.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_13_7_16_R5_B_scaffold_639_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2771..2986
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Celeribacter baekdonensis B30 RepID=K2JX29_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KFC63920.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Hypothetical protein
SCN18_13_7_16_R5_B_scaffold_639_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3408..4181
DNA (774bp) protein (258aa)
Extracellular solute-binding protein family 3 n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A657_STAND
Amino acid ABC transporter substrate-binding protein, PAAT family {ECO:0000313|EMBL:KFC63922.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
family 3 extracellular solute-binding protein
SCN18_13_7_16_R5_B_scaffold_639_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4253..4963
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FA7551
ABC transporter permease {ECO:0000313|EMBL:KFC63923.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
polar amino acid ABC transporter inner membrane subunit
SCN18_13_7_16_R5_B_scaffold_639_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4960..5676
DNA (717bp) protein (239aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A655_STAND
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:KFC63924.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
polar amino acid ABC transporter inner membrane subunit
SCN18_13_7_16_R5_B_scaffold_639_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5774..6028
DNA (255bp) protein (85aa)
UPI0003D03F8B related cluster n=1 Tax=unknown RepID=UPI0003D03F8B
Antitoxin {ECO:0000313|EMBL:ESZ25260.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
helix-turn-helix domain-containing protein
SCN18_13_7_16_R5_B_scaffold_639_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6028..6315
DNA (288bp) protein (96aa)
Msr1301 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98KV7_RHILO
hypothetical protein
Msr1301 protein {ECO:0000313|EMBL:BAB48707.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCN18_13_7_16_R5_B_scaffold_639_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6330..7082)
DNA (753bp) protein (251aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CYL3_9BRAD
SCN18_13_7_16_R5_B_scaffold_639_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7261..8127
DNA (867bp) protein (289aa)
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:KFC63925.1}; EC=1.1.1.31 {ECO:0000313|EMBL:KFC63925.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
6-phosphogluconate dehydrogenase NAD-binding n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UPN2_METS4
NAD-binding 6-phosphogluconate dehydrogenase
SCN18_13_7_16_R5_B_scaffold_639_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8213..8854)
DNA (642bp) protein (214aa)
Uracil-DNA glycosylase superfamily n=1 Tax=Methylobacterium extorquens (strain PA1) RepID=A9W2W1_METEP
Uracil DNA glycosylase superfamily protein {ECO:0000313|EMBL:KFC63927.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
uracil-DNA glycosylase superfamily protein
SCN18_13_7_16_R5_B_scaffold_639_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8851..9315)
DNA (465bp) protein (155aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC63928.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCN18_13_7_16_R5_B_scaffold_639_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9321..9785)
DNA (465bp) protein (155aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC63929.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCN18_13_7_16_R5_B_scaffold_639_15
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9789..10400)
DNA (612bp) protein (204aa)
glutathione S-transferase n=1 Tax=Hoeflea sp. 108 RepID=UPI00035EEF63
Glutathione S-transferase {ECO:0000313|EMBL:KFC63930.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
glutathione S-transferase
SCN18_13_7_16_R5_B_scaffold_639_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10578..11501)
DNA (924bp) protein (308aa)
Auxin Efflux Carrier n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UJA9_METS4
Transporter {ECO:0000313|EMBL:KIZ47872.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
auxin efflux carrier
SCN18_13_7_16_R5_B_scaffold_639_17
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11707..12258)
DNA (552bp) protein (184aa)
Nuclease (SNase domain protein) n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IKK9_XANP2
Succinoglycan biosynthesis protein {ECO:0000313|EMBL:KFC63931.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
nuclease
SCN18_13_7_16_R5_B_scaffold_639_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12344..13573
DNA (1230bp) protein (410aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1Z859_METPB
integral membrane sensor signal transduction histidine kinase
Displaying 18 items

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