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SCN18_13_7_16_R5_B_scaffold_726

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R5_B_scaffold_726_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..498
DNA (498bp) protein (166aa)
50S ribosomal protein L9 n=5 Tax=Methylobacterium extorquens RepID=RL9_METC4
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
rplL; 50S ribosomal protein L9
SCN18_13_7_16_R5_B_scaffold_726_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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652..2142
DNA (1491bp) protein (497aa)
DNA helicase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036494EA
Replicative DNA helicase {ECO:0000313|EMBL:KFC69002.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
replicative DNA helicase
SCN18_13_7_16_R5_B_scaffold_726_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2139..3269
DNA (1131bp) protein (377aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9WZH0_9RHIZ
SCN18_13_7_16_R5_B_scaffold_726_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3276..4700
DNA (1425bp) protein (475aa)
DNA repair protein RadA n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002ED960F
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
radA; DNA repair protein RadA
SCN18_13_7_16_R5_B_scaffold_726_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4894..5592
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003698118
Colicin V production protein {ECO:0000313|EMBL:KFC69005.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
colicin V production protein
SCN18_13_7_16_R5_B_scaffold_726_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5609..7093
DNA (1485bp) protein (495aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Amidophosphoribosyltransferase n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IHD9_BEII9
amidophosphoribosyltransferase
SCN18_13_7_16_R5_B_scaffold_726_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7111..7851
DNA (741bp) protein (247aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IEC3_METNO
Short-chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:KFC69007.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
short-chain dehydrogenase/reductase SDR
SCN18_13_7_16_R5_B_scaffold_726_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8034..8486)
DNA (453bp) protein (151aa)
NUDIX hydrolase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FMY2_9RHIZ
Nucleoside triphosphate pyrophosphohydrolase {ECO:0000313|EMBL:KFC69008.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
7,8-dihydro-8-oxoguanine-triphosphatase/thiamin-phosphate pyrophosphorylase-like protein
SCN18_13_7_16_R5_B_scaffold_726_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8510..9904)
DNA (1395bp) protein (465aa)
GTP-binding protein Der n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031E97CC
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
engA; GTP-binding protein EngA
SCN18_13_7_16_R5_B_scaffold_726_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9954..10616)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI00037C5E90
Uncharacterized protein {ECO:0000313|EMBL:KFC69010.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_13_7_16_R5_B_scaffold_726_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10890..11759
DNA (870bp) protein (290aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZZ38_STAND
2-dehydro-3-deoxyphosphooctonate aldolase
SCN18_13_7_16_R5_B_scaffold_726_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11752..12225
DNA (474bp) protein (158aa)
Major facilitator transporter n=1 Tax=Methylobacterium sp. GXF4 RepID=I9WRX1_9RHIZ
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:KFC69046.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
major facilitator superfamily protein
Displaying 12 items

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