ggKbase home page

SCN18_14_9_16_R1_B_scaffold_904

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_904_1
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1119)
DNA (1119bp) protein (373aa)
histidine kinase n=1 Tax=Dyella ginsengisoli RepID=UPI000344E13F
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:EIL87197.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
SCN18_14_9_16_R1_B_scaffold_904_2
CN-SCN_Arenimonas_307x, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1370..5047
DNA (3678bp) protein (1226aa)
ATPase/protein kinase family protein n=2 Tax=Singulisphaera acidiphila RepID=L0D8J3_SINAD
ATPase/protein kinase family protein
ATPase/protein kinase family protein {ECO:0000313|EMBL:AGA25552.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_14_9_16_R1_B_scaffold_904_3
unknown

Not on your lists

5170..6288
DNA (1119bp) protein (373aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_904_4
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6350..8716)
DNA (2367bp) protein (789aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MNT4_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE06814.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
SCN18_14_9_16_R1_B_scaffold_904_5
unknown

Not on your lists

comp(8713..9123)
DNA (411bp) protein (137aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_904_6
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9132..10217)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MNT2_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE06812.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
SCN18_14_9_16_R1_B_scaffold_904_7
unknown

Not on your lists

comp(10214..10576)
DNA (363bp) protein (121aa)
Uncharacterized protein (Fragment) n=1 Tax=Austwickia chelonae NBRC 105200 RepID=K6V8K8_9MICO
SCN18_14_9_16_R1_B_scaffold_904_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10573..10989)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XNG5_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33300.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_904_9
unknown

Not on your lists

comp(10976..11689)
DNA (714bp) protein (238aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_904_10
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11812..13005)
DNA (1194bp) protein (398aa)
Octaprenyl-diphosphate synthase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MNS9_CORCM
idsA1; octaprenyl-diphosphate synthase
Octaprenyl-diphosphate synthase {ECO:0000313|EMBL:AFE09118.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
SCN18_14_9_16_R1_B_scaffold_904_11
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

comp(13002..14174)
DNA (1173bp) protein (391aa)
Zeaxanthin epoxidase (EC:1.14.13.90)
Zeaxanthin epoxidase {ECO:0000313|EMBL:ACZ40773.1}; EC=1.14.13.90 {ECO:0000313|EMBL:ACZ40773.1};; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
Zeaxanthin epoxidase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAD0_SPHTD
SCN18_14_9_16_R1_B_scaffold_904_12
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14556..15215
DNA (660bp) protein (220aa)
LuxR family transcriptional regulator n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MNY1_CORCM
hthA; LuxR family transcriptional regulator
LuxR family transcriptional regulator {ECO:0000313|EMBL:AFE09095.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
SCN18_14_9_16_R1_B_scaffold_904_13
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(15362..16138)
DNA (777bp) protein (259aa)
hypothetical protein
hypothetical protein id=5241271 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
SCN18_14_9_16_R1_B_scaffold_904_14
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16150..18207)
DNA (2058bp) protein (686aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
DNA ligase n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=DNLJ_METI4
lig; NAD-dependent DNA ligase
SCN18_14_9_16_R1_B_scaffold_904_15
unknown

Not on your lists

18877..19218
DNA (342bp) protein (114aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_904_16
SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19315..19944)
DNA (630bp) protein (210aa)
SCN18_14_9_16_R1_B_scaffold_904_17
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19946..21193)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GAU5_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN92911.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_904_18
scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, Eukaryote

Not on your lists

comp(21516..22163)
DNA (648bp) protein (216aa)
protein kinase (EC:2.7.11.1)
Protein kinase {ECO:0000313|EMBL:CAN92912.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN92912.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GAU7_SORC5
Displaying 18 items

View Taxonomy