ggKbase home page

SCN18_14_9_16_R1_B_scaffold_908

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_908_1
unknown

Not on your lists

comp(3..149)
DNA (147bp) protein (49aa)
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_908_2
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(300..602)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y864_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF05884.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_908_3
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(850..3393)
DNA (2544bp) protein (848aa)
cafA; ribonuclease G (EC:3.1.4.-)
Ribonuclease G n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ESZ7_SORC5
Cytoplasmic axial filament protein CafA and Ribonuclease G {ECO:0000313|EMBL:EYF05883.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
SCN18_14_9_16_R1_B_scaffold_908_4
Rhodanobacter denitrificans_SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_69_165, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4345..6681
DNA (2337bp) protein (779aa)
Putative uncharacterized protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D1B3_MYXXD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF89877.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
SCN18_14_9_16_R1_B_scaffold_908_5
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6784..7677
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UHV5_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:EYF01490.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_908_6
unknown

Not on your lists

7677..7784
DNA (108bp) protein (36aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_908_7
SCN_Clostridium_9x, SCN_Clostridium_9x, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7781..8764
DNA (984bp) protein (328aa)
ABC transporter ATP-binding protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N078_CORCM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EYF01491.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
yfiL; ABC transporter ATP-binding protein
SCN18_14_9_16_R1_B_scaffold_908_8
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8757..9263)
DNA (507bp) protein (169aa)
activator of HSP90 ATPase n=1 Tax=Rhizobium loti RepID=UPI00037156A9
Uncharacterized protein {ECO:0000313|EMBL:EYC52975.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
activator of Hsp90 ATPase 1-like protein
SCN18_14_9_16_R1_B_scaffold_908_9
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9266..9724)
DNA (459bp) protein (153aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I3N9_9RHIZ
Putative glutathione S-transferase-related transmembrane protein {ECO:0000313|EMBL:AKF03146.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
activator of Hsp90 ATPase 1 family protein
SCN18_14_9_16_R1_B_scaffold_908_10
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9721..10080)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035D578E
Transcriptional regulator, ArsR family protein {ECO:0000313|EMBL:AKF03147.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
ArsR family transcriptional regulator
SCN18_14_9_16_R1_B_scaffold_908_11
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10172..10816)
DNA (645bp) protein (215aa)
Transcriptional regulator, TetR family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTM6_PARL1
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:AKF04717.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
TetR family transcriptional regulator
SCN18_14_9_16_R1_B_scaffold_908_12
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10940..11674
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTM7_PARL1
Uncharacterized protein {ECO:0000313|EMBL:EYF04442.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_908_13
SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12021..15053
DNA (3033bp) protein (1011aa)
Similar to eukaryotic hydroxysteroid (17-beta) dehydrogenase 4 n=1 Tax=gamma proteobacterium HdN1 RepID=E1VKF1_9GAMM
Oxidoreductase, short chain dehydrogenase/reductase family {ECO:0000313|EMBL:AKF09773.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
eukaryotic hydroxysteroid (17-beta) dehydrogenase 4
SCN18_14_9_16_R1_B_scaffold_908_14
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

15178..16359
DNA (1182bp) protein (394aa)
Lipid-transfer protein n=1 Tax=Alcanivorax sp. P2S70 RepID=U7G6H8_9GAMM
3-ketoacyl-CoA thiolase {ECO:0000313|EMBL:AKF09772.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
tioL; thiolase
SCN18_14_9_16_R1_B_scaffold_908_15
unknown

Not on your lists

comp(16454..17197)
DNA (744bp) protein (248aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_908_16
unknown

Not on your lists

17456..18310
DNA (855bp) protein (285aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_908_17
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18384..19472
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YBC5_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41631.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_908_18
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19474..20184
DNA (711bp) protein (237aa)
Putative secreted protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FAX8_SORC5
hypothetical protein
Putative secreted protein {ECO:0000313|EMBL:CAN97953.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_908_19
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

20181..21302
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y850_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41632.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_908_20
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21363..21887)
DNA (525bp) protein (175aa)
XRE family transcriptional regulator n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B65CE1
Transcriptional regulator ClgR {ECO:0000313|EMBL:KJL19510.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
Displaying 20 items

View Taxonomy