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SCN18_14_9_16_R1_B_scaffold_1089

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_1089_1
SCNpilot_P_inoc_Xanthomonadales_63_13, SCNpilot_P_inoc_Xanthomonadales_63_13, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..779)
DNA (777bp) protein (259aa)
Putative enzyme n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G850_9DELT
Esterase/lipase/thioesterase family protein {ECO:0000313|EMBL:KIG13487.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
putative alpha/beta hydrolase
SCN18_14_9_16_R1_B_scaffold_1089_2
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(994..2055)
DNA (1062bp) protein (354aa)
astA; arginine N-succinyltransferase (EC:2.3.1.109)
Arginine N-succinyltransferase {ECO:0000313|EMBL:CAN91796.1}; EC=2.3.1.109 {ECO:0000313|EMBL:CAN91796.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Arginine N-succinyltransferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FDU6_SORC5
SCN18_14_9_16_R1_B_scaffold_1089_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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2209..3126
DNA (918bp) protein (306aa)
Zinc ABC transporter, periplasmic-binding protein ZnuA {ECO:0000313|EMBL:AKF05478.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
ABC-type metal ion transporter, periplasmic subunit id=3055484 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
periplasmic solute binding protein
SCN18_14_9_16_R1_B_scaffold_1089_4
SCNpilot_P_inoc_Sphingobacteriales_44_17, SCNpilot_P_inoc_Sphingobacteriales_44_17, SCNpilot_P_inoc_Sphingobacteriales_44_17, SCNpilot_P_inoc_Sphingobacteriales_44_17, Bacteroidetes, Bacteria

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3123..4079
DNA (957bp) protein (319aa)
ABC transporter related protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CU94_TRURR
Zinc ABC transporter, ATP-binding protein ZnuC {ECO:0000313|EMBL:AKF05479.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
ABC transporter-like protein
SCN18_14_9_16_R1_B_scaffold_1089_5
CN-SCN_Eukaryote_25x, CN-SCN_Eukaryote_25x, CN-SCN_Eukaryote_25x, CN-SCN_Eukaryote_25x, CN-SCN_Eukaryote_25x, Eukaryote

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4263..6002
DNA (1740bp) protein (580aa)
Putetive secreted protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GET3_SORC5
Putetive hypothetical protein
Putetive secreted protein {ECO:0000313|EMBL:CAN93053.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_1089_6
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6092..7153
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Rhizobium etli (strain CFN 42 / ATCC 51251) RepID=Q2K6Q7_RHIEC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC91479.1}; TaxID=347834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CFN 42 / ATCC 51251).;"
SCN18_14_9_16_R1_B_scaffold_1089_7
unknown

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comp(7269..8363)
DNA (1095bp) protein (365aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1089_8
unknown

Not on your lists

8745..9467
DNA (723bp) protein (241aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1089_9
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9464..10048
DNA (585bp) protein (195aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LMP8_HALO1
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ACY18735.1}; Flags: Precursor;; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
SCN18_14_9_16_R1_B_scaffold_1089_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10219..12060
DNA (1842bp) protein (614aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ESP0_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN97404.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_1089_11
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12172..13548
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G3E3_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN95753.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_1089_12
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13571..15403)
DNA (1833bp) protein (611aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00037D4A7E
Di-heme cytochrome c peroxidase
Di-heme cytochrome c peroxidase {ECO:0000313|EMBL:AHG93465.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
SCN18_14_9_16_R1_B_scaffold_1089_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15434..16393)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y187_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP38494.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_1089_14
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

Not on your lists

comp(16407..18017)
DNA (1611bp) protein (537aa)
protein kinase (EC:2.7.11.1)
Protein kinase {ECO:0000313|EMBL:CAN92009.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN92009.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FNZ9_SORC5
SCN18_14_9_16_R1_B_scaffold_1089_15
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18111..20189)
DNA (2079bp) protein (693aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XZY9_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP36223.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_1089_16
unknown

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comp(20272..20670)
DNA (399bp) protein (133aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1089_17
unknown

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comp(20667..21380)
DNA (714bp) protein (238aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1089_trna_1
unknown

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22044..22115
DNA (72bp)
transferRNA Val
SCN18_14_9_16_R1_B_scaffold_1089_18
unknown

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22467..23465
DNA (999bp) protein (333aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1089_19
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23795..24811
DNA (1017bp) protein (339aa)
RNA polymerase sigma factor FliA n=1 Tax=Thauera phenylacetica B4P RepID=N6ZSJ6_9RHOO
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
RNA polymerase sigma factor for flagellar operon
SCN18_14_9_16_R1_B_scaffold_1089_20
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26142..27383
DNA (1242bp) protein (414aa)
glycosyltransferase (EC:2.-.-.-)
Glycosyltransferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EXX7_SORC5
Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase {ECO:0000313|EMBL:AKF07002.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
SCN18_14_9_16_R1_B_scaffold_1089_21
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

28334..30400
DNA (2067bp) protein (689aa)
Capsular exopolysaccharide family protein n=2 Tax=Myxococcus xanthus RepID=Q1DDI7_MYXXD
capsular exopolysaccharide family protein
Capsular exopolysaccharide family protein {ECO:0000313|EMBL:ABF90823.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
SCN18_14_9_16_R1_B_scaffold_1089_22
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

30809..32107
DNA (1299bp) protein (433aa)
Group 1 family glycosyl transferase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CJC3_MYXFH
group 1 family glycosyl transferase
Group 1 family glycosyl transferase {ECO:0000313|EMBL:AEI62636.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
SCN18_14_9_16_R1_B_scaffold_1089_23
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

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32104..33267
DNA (1164bp) protein (388aa)
Poly(Glycerol-phosphate) alpha-glucosyltransferase protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SRW7_9DELT
Poly(Glycerol-phosphate) alpha-glucosyltransferase protein {ECO:0000313|EMBL:ERK91435.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
pimB1; group 1 glycosyl transferase
SCN18_14_9_16_R1_B_scaffold_1089_24
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33264..34499
DNA (1236bp) protein (412aa)
Glycosyl transferase group 1 n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HLK3_CYAP4
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACL43491.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
SCN18_14_9_16_R1_B_scaffold_1089_25
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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34496..35656
DNA (1161bp) protein (387aa)
Glycosyl transferase group 1 n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HLI9_CYAP4
Glycosyltransferase, group 1 family {ECO:0000313|EMBL:EKE98413.1}; TaxID=1188 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;"
group 1 glycosyl transferase
SCN18_14_9_16_R1_B_scaffold_1089_26
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35657..37600
DNA (1944bp) protein (648aa)
asparagine synthase (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2ILL8_ANADE
Asparagine synthetase {ECO:0000313|EMBL:AKF04696.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
SCN18_14_9_16_R1_B_scaffold_1089_27
SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, Verrucomicrobia

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37600..38853
DNA (1254bp) protein (418aa)
group 1 glycosyl transferase (EC:2.4.1.-)
Glycosyl transferase, group 1 n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FUI3_STIAD
Glycosyltransferase {ECO:0000313|EMBL:KFE71499.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
SCN18_14_9_16_R1_B_scaffold_1089_28
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

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comp(39695..40648)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002FC11C0
glycosyl transferase
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABB42276.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
SCN18_14_9_16_R1_B_scaffold_1089_29
unknown

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comp(40645..40989)
DNA (345bp) protein (115aa)

This feature has no annotations

Displaying items 1-30 of 36 in total

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