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SCN18_14_9_16_R1_B_scaffold_1129

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_1129_1
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

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comp(2..1198)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YF13_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41468.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_1129_2
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

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1803..2132
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6D4N8_9VIBR
Uncharacterized protein {ECO:0000313|EMBL:KIF35001.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
putative uncharacterized protein
SCN18_14_9_16_R1_B_scaffold_1129_3
unknown

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2214..2708
DNA (495bp) protein (165aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1129_4
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2765..3703)
DNA (939bp) protein (313aa)
Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GLW1_SORC5
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EYF05059.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
LysR family transcriptional regulator
SCN18_14_9_16_R1_B_scaffold_1129_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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3793..4659
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7F5_9BACT
hypothetical protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
SCN18_14_9_16_R1_B_scaffold_1129_6
scnpilot_dereplicated_Eukaryote_Rotifera_1, scnpilot_dereplicated_Eukaryote_Rotifera_1, scnpilot_dereplicated_Eukaryote_Rotifera_1, scnpilot_dereplicated_Eukaryote_Rotifera_1, scnpilot_dereplicated_Eukaryote_Rotifera_1, Eukaryote

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comp(4674..5780)
DNA (1107bp) protein (369aa)
Putative permease n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5Y6N1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:AKF10750.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1129_7
SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, Actinobacteria, Actinobacteria, Bacteria

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5933..6388
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G7S6_SORC5
ComA operon protein 2 {ECO:0000313|EMBL:EYF08865.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1129_8
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6414..7181)
DNA (768bp) protein (256aa)
Haloacid dehalogenase domain protein hydrolase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IBW5_METNO
haloacid dehalogenase domain-containing protein hydrolase
Haloacid dehalogenase domain protein hydrolase {ECO:0000313|EMBL:ACL61147.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCN18_14_9_16_R1_B_scaffold_1129_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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7441..9033
DNA (1593bp) protein (531aa)
Putative secreted protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G769_SORC5
hypothetical protein
Putative secreted protein {ECO:0000313|EMBL:CAN92785.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_1129_10
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(9063..9881)
DNA (819bp) protein (273aa)
dehydrogenase (EC:1.1.1.-)
Oxidoreductase n=1 Tax=Rhodococcus ruber BKS 20-38 RepID=M2YR30_9NOCA
Oxidoreductase {ECO:0000313|EMBL:EME57312.1}; TaxID=1278076 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber BKS 20-38.;"
SCN18_14_9_16_R1_B_scaffold_1129_11
Acinetobacter sp. NIPH 809_SCNpilot_P_inoc_Acinetobacter_41_9_partial, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9912..11102)
DNA (1191bp) protein (397aa)
Fatty acid desaturase family protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D6Y6_MYXXD
Putative LINOLEOYL-CoA DESATURASE (DELTA(6)-DESATURASE) {ECO:0000313|EMBL:EYF08790.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
fatty acid desaturase
SCN18_14_9_16_R1_B_scaffold_1129_12
SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11213..12853)
DNA (1641bp) protein (547aa)
hypothetical protein n=1 Tax=Salinimonas chungwhensis RepID=UPI00035D6DD7
von Willebrand factor type A
von Willebrand factor type A {ECO:0000313|EMBL:AGN02240.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;"
SCN18_14_9_16_R1_B_scaffold_1129_13
unknown

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13461..14138
DNA (678bp) protein (226aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1129_14
CN-SCN_Arenimonas_307x, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14175..14669)
DNA (495bp) protein (165aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GI50_9DELT
FKBP-type peptidyl-prolyl cis-trans isomerase 2-like protein
SCN18_14_9_16_R1_B_scaffold_1129_15
unknown

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comp(15376..15696)
DNA (321bp) protein (107aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1129_16
scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, Eukaryote

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comp(15881..16972)
DNA (1092bp) protein (364aa)
Glutathione gamma-glutamylcysteinyltransferase (EC:2.3.2.15)
Glutathione gamma-glutamylcysteinyltransferase {ECO:0000313|EMBL:AFZ07216.1}; EC=2.3.2.15 {ECO:0000313|EMBL:AFZ07216.1};; TaxID=179408 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria nigro-viridis PCC 7112.;"
Glutathione gamma-glutamylcysteinyltransferase n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VGZ2_9CYAN
SCN18_14_9_16_R1_B_scaffold_1129_17
Streptomyces sp. SM8, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17163..18008
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Streptomyces RepID=UPI000361107D
Uncharacterized protein {ECO:0000313|EMBL:EKC95613.1}; Flags: Precursor;; TaxID=1195457 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. SM8.;"
hypothetical protein
Displaying 17 items

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