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SCN18_14_9_16_R1_B_scaffold_1156

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_1156_1
unknown

Not on your lists

comp(3..248)
DNA (246bp) protein (82aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1156_2
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(248..1465)
DNA (1218bp) protein (406aa)
Extracellular cysteine-rich protein, putative n=1 Tax=Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006) RepID=B8LZY8_TALSN
Uncharacterized protein {ECO:0000313|EMBL:EYF06307.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1156_3
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1534..2346)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y2F3_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP38949.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_1156_4
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(2348..2992)
DNA (645bp) protein (215aa)
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G8V0_SORC5
ECF family RNA polymerase sigma factor
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN99073.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_1156_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3040..4011)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XUD1_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP35470.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_1156_6
unknown

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4240..4419
DNA (180bp) protein (60aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1156_7
SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4341..5495)
DNA (1155bp) protein (385aa)
Aminotransferase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BBM0_STRRD
aminotransferase
Aminotransferase {ECO:0000313|EMBL:ACZ86089.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCN18_14_9_16_R1_B_scaffold_1156_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5505..6623)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QJ62_9DELT
hypothetical protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
SCN18_14_9_16_R1_B_scaffold_1156_9
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

6882..8594
DNA (1713bp) protein (571aa)
protein kinase (EC:2.7.11.1)
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EZ28_SORC5
Serine/threonine protein kinase PknB {ECO:0000313|EMBL:EYF06887.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
SCN18_14_9_16_R1_B_scaffold_1156_10
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8905..12240
DNA (3336bp) protein (1112aa)
Uncharacterized protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WVZ1_ACISM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW70750.1}; Flags: Precursor;; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
SCN18_14_9_16_R1_B_scaffold_1156_11
unknown

Not on your lists

12249..12902
DNA (654bp) protein (218aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1156_12
Mus musculus, Mus, Rodentia, Mammalia, Chordata, Metazoa

Not on your lists

13028..13915
DNA (888bp) protein (296aa)
Lost on transformation protein 1 n=1 Tax=Mus musculus RepID=Q9EPT3_MOUSE
Lost on transformation protein 1 {ECO:0000313|EMBL:AAG48331.1}; TaxID=10090 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus.;" source="Mus musculus (Mouse).;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1156_13
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13925..15178
DNA (1254bp) protein (418aa)
amidase, hydantoinase/carbamoylase family protein (EC:3.5.-.-)
Amidase, hydantoinase/carbamoylase family n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QAD3_ACIAP
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
SCN18_14_9_16_R1_B_scaffold_1156_14
Verticillium alfalfae, Verticillium, Glomerellales, Hypocreomycetidae, Ascomycota, Fungi

Not on your lists

comp(15233..15757)
DNA (525bp) protein (175aa)
Predicted protein n=1 Tax=Verticillium alfalfae (strain VaMs.102 / ATCC MYA-4576 / FGSC 10136) RepID=C9SJM3_VERA1
Predicted protein {ECO:0000313|EMBL:EEY19637.1}; TaxID=526221 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Glomerellales; Plectosphaerellaceae; mitosporic Plectosphaerellaceae; Verticillium.;" source="Verticillium alfalfae (strain VaMs.102 / ATCC MYA-4576 / FGSC 10136); (Verticillium wilt of alfalfa) (Verticillium albo-atrum).;"
SCN18_14_9_16_R1_B_scaffold_1156_15
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(15978..17225)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FYZ1_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EDM81146.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1156_16
unknown

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comp(17489..17665)
DNA (177bp) protein (59aa)

This feature has no annotations

Displaying 16 items

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