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SCN18_14_9_16_R1_B_scaffold_1169

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_1169_1
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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1..1062
DNA (1062bp) protein (354aa)
Conserved hypothetical membrane protein n=2 Tax=Chloroflexus RepID=A9WKG6_CHLAA
hypothetical protein
Conserved hypothetical membrane protein {ECO:0000313|EMBL:ABY36594.1}; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).;"
SCN18_14_9_16_R1_B_scaffold_1169_2
SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, Verrucomicrobia

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1059..3695
DNA (2637bp) protein (879aa)
von Willebrand factor type A n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6B0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AKF07671.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1169_3
unknown

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comp(3676..4191)
DNA (516bp) protein (172aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1169_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4445..5368)
DNA (924bp) protein (308aa)
ATP synthase gamma chain n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YHR6_SORCE
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
ATP synthase subunit gamma
SCN18_14_9_16_R1_B_scaffold_1169_5
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(5375..7051)
DNA (1677bp) protein (559aa)
F0F1 ATP synthase subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha n=1 Tax=Prosthecochloris aestuarii (strain DSM 271 / SK 413) RepID=B4S3X3_PROA2
ATP synthase alpha chain {ECO:0000313|EMBL:AKF05464.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
SCN18_14_9_16_R1_B_scaffold_1169_6
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7131..7673)
DNA (543bp) protein (181aa)
ATP synthase subunit delta n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YDB1_SORCE
ATP synthase subunit delta
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_1169_7
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7670..8428)
DNA (759bp) protein (253aa)
atpF1; H(+)-transporting two-sector ATPase (EC:3.6.3.14)
ATPase n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B31703
ATP synthase F0 sector subunit b {ECO:0000313|EMBL:AKF05462.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
SCN18_14_9_16_R1_B_scaffold_1169_8
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8425..8928)
DNA (504bp) protein (168aa)
ATP synthase subunit b n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YA80_SORCE
hypothetical protein
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_1169_9
scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, Eukaryote

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comp(9130..9987)
DNA (858bp) protein (286aa)
SCN18_14_9_16_R1_B_scaffold_1169_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10057..10380)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQL4_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN90462.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_1169_11
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10377..10997)
DNA (621bp) protein (207aa)
Bacterioferritin comigratory protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FL26_SORC5
Thiol peroxidase, Bcp-type {ECO:0000313|EMBL:EYF04179.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
bacterioferritin comigratory protein
SCN18_14_9_16_R1_B_scaffold_1169_12
unknown

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11170..11724
DNA (555bp) protein (185aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1169_13
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11729..13201
DNA (1473bp) protein (491aa)
toluene 4-monooxygenase protein A (EC:1.14.13.-)
Uncharacterized protein {ECO:0000313|EMBL:AEW06464.1}; EC=1.14.13.- {ECO:0000313|EMBL:AEW06464.1};; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfobacillus acidophilus (strain ATCC 700253 / DSM 10332 / NAL).;"
Methane/phenol/toluene hydroxylase n=2 Tax=Sulfobacillus acidophilus RepID=F8I8D7_SULAT
SCN18_14_9_16_R1_B_scaffold_1169_14
unknown

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13203..13481
DNA (279bp) protein (93aa)
SCN18_14_9_16_R1_B_scaffold_1169_15
SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13478..13798
DNA (321bp) protein (107aa)
2Fe-2S ferredoxin n=1 Tax=Azoarcus toluclasticus RepID=UPI0003775D54
Toluene-4-monooxygenase system protein C {ECO:0000313|EMBL:EWS63927.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
Rieske (2Fe-2S) domain-containing protein
SCN18_14_9_16_R1_B_scaffold_1169_16
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13795..14100
DNA (306bp) protein (102aa)
SCN18_14_9_16_R1_B_scaffold_1169_17
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14097..15074
DNA (978bp) protein (326aa)
Methane/phenol/toluene hydroxylase n=1 Tax=Rhodococcus wratislaviensis IFP 2016 RepID=L2TG25_9NOCA
Methane/phenol/toluene hydroxylase {ECO:0000313|EMBL:ELB90070.1}; TaxID=1195242 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis IFP 2016.;"
methane/phenol/toluene hydroxylase
SCN18_14_9_16_R1_B_scaffold_1169_18
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

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15071..16501
DNA (1431bp) protein (477aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
PAS domain S-box n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WCX2_9CYAN
PAS domain-containing protein
SCN18_14_9_16_R1_B_scaffold_1169_19
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16498..16932
DNA (435bp) protein (145aa)
Response regulator receiver protein n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ATD8_PELPD
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ABL00609.1}; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
SCN18_14_9_16_R1_B_scaffold_1169_20
Dyadobacter fermentans_SCNpilot_P_inoc_Dyadobacter_48_40, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(16962..17477)
DNA (516bp) protein (172aa)
protein kinase (EC:2.7.11.1)
Protein kinase {ECO:0000313|EMBL:CAN90464.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN90464.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQL8_SORC5
Displaying 20 items

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